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Report for CCDS50931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50931.1 Public Mus musculus 3 1110032F04Rik 23 108 98 CCDS HistoryNCBI Gene:68725Re-query CCDS DB by CCDS ID:50931.1Re-query CCDS DB by GeneID:68725See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50931.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000054551.2 ENSMUSP00000056782.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054551.2Link to Ensembl Protein Viewer:ENSMUSP00000056782.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000054551Re-query CCDS DB by Protein ID:ENSMUSP00000056782
Original member NCBI NM_001167996.1 NP_001161468.1 Updated not alive Link to Nucleotide Sequence:NM_001167996.1Link to Protein Sequence:NP_001161468.1Re-query CCDS DB by Nucleotide ID:NM_001167996Re-query CCDS DB by Protein ID:NP_001161468
Current member NCBI NM_001167996.2 NP_001161468.1 Accepted alive Link to Nucleotide Sequence:NM_001167996.2Link to Protein Sequence:NP_001161468.1Re-query CCDS DB by Nucleotide ID:NM_001167996Re-query CCDS DB by Protein ID:NP_001161468Link to BLAST:NP_001161468.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161468.1 247 E9Q0B3 247 100% 0 0

Chromosomal Locations for CCDS 50931.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 68869708 68870451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGTGGGGTCCCGGGGTCACCGCCGAGGGCCTGTCGGTGGCTCCAGCGCCACCGCCGCTGCTGCCGCTGC
TG
CTGCTGTTGGCGCTGGCGTTGGTGGCGCCCTCGCGGGGCGGCGGGGGCTGCGCGGAGCTGGCGTGCGG
T
GAGCGGGAGCGCTGCTGCGACTCGGCCAACGCCACGGCCGTGCGCTGCTGCAAGCTGCCGCTCCACGCC
TTT
CTGGACAACGTGGGCTGGTTCGTCCGCAAGCTCTCTGGGCTGCTCATCCTGCTGGTGCTCTTCGCCA
TC
GGCTACTTCCTGCAGCGCATCATCTGCCCCAGCCCACGCAGGTACCCGCGTGGCCAGGCGCGACCTGG
C
CAGGCACGACCCGGGCCTCCCGGGGGTGCGGGACCGCCGGGGACGGCGGGGCCACCCGACGACGACGAC
GAC
TCGCCCGCTCTGCTGCGCGACGAGGTGGCCGCGGGCTCGCAGGACTCACTGTTGGATAGTGGCGGTG
GT
CGGGGCCGAGGAAGTGGCGGACGCCTGCCTCCCTCCTGCGTTTCGGAGCACGAGCTGCACGTGGTGTC
A
CCGGTGTTTCTCCAGCTGCCCAGCTACGAGGAGGTCAAGTACCTGCCCACCTATGAGGAGTCCATGCGG
CTG
CAGCAGCTCAGCCCAGCGGAGGTCGTGCTGCCCGTGTCGGTGCTCGGCCGCCCGCGAGGCGGCAGTG
CC
GGGGACTCCGACGGCGGCCAGGTCCGTTTCCCGCTCATCTGA


Translation (247 aa):
MWGPGVTAEGLSVAPAPPPLLPLLLLLALALVAPSRGGGGCAELACGERERCCDSANATAVRCCKLPLHA
F
LDNVGWFVRKLSGLLILLVLFAIGYFLQRIICPSPRRYPRGQARPGQARPGPPGGAGPPGTAGPPDDDD
D
SPALLRDEVAAGSQDSLLDSGGGRGRGSGGRLPPSCVSEHELHVVSPVFLQLPSYEEVKYLPTYEESMR
L
QQLSPAEVVLPVSVLGRPRGGSAGDSDGGQVRFPLI




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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