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Report for CCDS89577.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89577.1 Public Mus musculus 2 Tox2 23 108 98 CCDS HistoryNCBI Gene:269389Re-query CCDS DB by CCDS ID:89577.1Re-query CCDS DB by GeneID:269389See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89577.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109428.8 ENSMUSP00000105055.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109428.8Link to Ensembl Protein Viewer:ENSMUSP00000105055.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000109428Re-query CCDS DB by Protein ID:ENSMUSP00000105055
Current member NCBI NM_001372576.1 NP_001359505.1 Accepted alive Link to Nucleotide Sequence:NM_001372576.1Link to Protein Sequence:NP_001359505.1Re-query CCDS DB by Nucleotide ID:NM_001372576Re-query CCDS DB by Protein ID:NP_001359505Link to BLAST:NP_001359505.1

Chromosomal Locations for CCDS 89577.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 163203164 163203262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163247767 163247832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163275969 163276214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163314322 163314561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163315795 163316022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163319562 163319642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163320298 163320690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163321421 163321548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163322744 163322780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1518 nt):
ATGGACGTCCGCCTGTATCCCTCGGCGCCCGCGGTAGGTGCGCGGCCCGGGGCCGAGCCGGCCGGCCTGG
CACACCTGGACTACTACCACTGCGGCAAGTTTGATGGTGACAGTGCCTACGTGGGGATGAGTGACGGAAA
TCCAGAGCTCCTGTCAACCAGCCAGACCTATAACAGCCAGGGCGAGAGTAACGAAGACTATGAGATTCCT
CCTATAACGCCTCCCAATCTCCCTGAGCCATCCCTCCTGCACCTGGGGGATCACGAAGCCGGCTACCACT
CGCTGTGTCACGGCCTTGCGCCCAACGGTCTGCTCCCTGCCTACTCGTACCAAGCAATGGATCTCCCTGC
CATCATGGTGTCCAACATGCTGGCCCAGGACGGCCATCTGCTGTCAGGCCAGCTGCCCACGATCCAGGAA
ATGGTCCACTCGGAGGTGGCGGCATATGACTCAGGCCGGCCAGGGCCCCTGCTGGGCCGCCCGGCGATGC
TGGCCAGCCACATGAGTGCCCTCAGCCAGTCTCAGCTCATCTCCCAGATGGGTATCCGGAGTGGCATTGC
TCACGGCTCCCCATCACCTCCAGGGAGCAAGTCAGCGACCCCCTCTCCATCCAGTTCCACACAGGAGGAG
GAATCAGATGCCCATTTCAAGATCTCGGGAGAGAAGAGACCCTCAGTGGACCCAGGCAAAAAGGCCAAGA
ATCCAAAGAAGAAGAAGAAGAAGGACCCCAATGAGCCACAGAAGCCAGTGTCGGCCTACGCTCTCTTCTT
CAGAGACACTCAGGCTGCCATCAAGGGGCAGAATCCCAGTGCCACCTTTGGAGATGTGTCCAAAATAGTG
GCGTCCATGTGGGACAGCCTGGGAGAAGAGCAGAAACAGGCGTATAAGAGGAAGACTGAAGCTGCCAAGA
AGGAGTACCTGAAAGCCTTGGCGGCCTACAGAGCTAGCCTCGTGTCCAAGAGCCCCCCGGACCAAGGTGA
GGCCAAGAACACTCAGGCAAACCCACCAGCCAAAATGCTTCCACCCAAGCAGCCCATGTACGCCATGCCC
GGCCTGGCTTCCTTCCTGACGCCCTCCGACCTGCAGGCCTTCCGCAGTGGAGCCTCTCCCGCCAGCCTTG
CCAGGACGCTGGGCTCCAAGGCCCTGCTGCCGGGCCTCAGCACATCGCCGCCACCACCCTCCTTCCCTCT
CAGCCCCTCACTGCACCAGCAGCTGCCACTGCCCCCCCACGCGCAGGGCACTCTCCTCAGCCCGCCTCTC
AGCATGTCCCCAGCCCCGCAGCCTCCTGTCCTGCCTGCCTCCATGGCACTCCAGGTGCAGCTGGCGATGA
GCCCCTCACCTCCAGGGCCACAGGACTTCCCACACATCTCTGATTTCTCCAGTGGCTCTGGCTCCCGCTC
ACCTGGCCCATCCAACCCTTCCAGCAGCGGAGACTGGGATGGGAGTTACCCCAGTGGGGAGCGTGGCCTC
GGCACCTGCAGCCTGCTCCCCAGGGATAAATCGCTCTACCTCACCTAA

Translation (505 aa):
MDVRLYPSAPAVGARPGAEPAGLAHLDYYHCGKFDGDSAYVGMSDGNPELLSTSQTYNSQGESNEDYEIP
PITPPNLPEPSLLHLGDHEAGYHSLCHGLAPNGLLPAYSYQAMDLPAIMVSNMLAQDGHLLSGQLPTIQE
MVHSEVAAYDSGRPGPLLGRPAMLASHMSALSQSQLISQMGIRSGIAHGSPSPPGSKSATPSPSSSTQEE
ESDAHFKISGEKRPSVDPGKKAKNPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIV
ASMWDSLGEEQKQAYKRKTEAAKKEYLKALAAYRASLVSKSPPDQGEAKNTQANPPAKMLPPKQPMYAMP
GLASFLTPSDLQAFRSGASPASLARTLGSKALLPGLSTSPPPPSFPLSPSLHQQLPLPPHAQGTLLSPPL
SMSPAPQPPVLPASMALQVQLAMSPSPPGPQDFPHISDFSSGSGSRSPGPSNPSSSGDWDGSYPSGERGL
GTCSLLPRDKSLYLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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