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Report for CCDS47818.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47818.1 Public Homo sapiens 8 XPO7 24 110 108 CCDS HistoryNCBI Gene:23039Re-query CCDS DB by CCDS ID:47818.1Re-query CCDS DB by GeneID:23039See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47818.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000252512.14 ENSP00000252512.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000252512.14Link to Ensembl Protein Viewer:ENSP00000252512.9Re-query CCDS DB by Nucleotide ID:ENST00000252512Re-query CCDS DB by Protein ID:ENSP00000252512
Original member Current member NCBI NM_015024.5 NP_055839.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015024.5Link to Protein Sequence:NP_055839.3Re-query CCDS DB by Nucleotide ID:NM_015024Re-query CCDS DB by Protein ID:NP_055839Link to BLAST:NP_055839.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055839.3 1087 Q9UIA9 1087 100% 0 0

Chromosomal Locations for CCDS 47818.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 21919771 21919788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21966857 21967003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21969483 21969576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21970144 21970310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21971876 21971941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21974670 21974774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21976356 21976521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21977770 21977843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21980084 21980203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21981731 21981877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21982640 21982812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21984646 21984839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21985586 21985691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21987141 21987276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21987784 21987857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21989003 21989083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21990344 21990407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21990811 21990919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21991868 21991974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21994363 21994451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21995492 21995599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21998755 21998837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21999091 21999305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 21999536 21999674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22002112 22002272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22003219 22003317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22003903 22004030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22004995 22005088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3264 nt):
ATGGCGGATCATGTGCAGAGCCTGGCCCAACTAGAGAATCTGTGCAAACAGCTGTATGAAACCACAGACA
CAACCACTCGACTCCAGGCAGAGAAAGCCTTGGTTGAATTTACCAACAGCCCTGATTGCCTGAGCAAGTG
CCAGCTACTCCTCGAAAGAGGAAGTTCCTCTTACTCCCAGTTACTGGCAGCTACATGCCTTACCAAGCTT
GTATCACGCACAAACAACCCCCTACCATTGGAACAGCGAATAGATATTCGGAACTATGTGCTCAACTACC
TTGCCACTCGGCCGAAGTTGGCTACTTTCGTGACACAAGCACTTATTCAGTTATATGCCAGAATCACAAA
ACTGGGCTGGTTTGACTGTCAGAAGGATGACTATGTCTTCAGAAATGCAATCACAGACGTCACAAGGTTT
TTACAGGATAGTGTTGAATACTGCATCATTGGTGTCACAATTTTATCTCAGCTAACCAATGAAATTAATC
AAGCAGACACCACCCATCCTTTAACCAAGCACAGAAAAATAGCCTCTTCTTTTCGCGATTCATCATTATT
TGATATCTTCACACTTTCCTGCAATTTACTAAAACAGGCTTCAGGAAAGAATCTAAACTTGAATGATGAA
AGTCAGCATGGCTTGCTCATGCAACTGCTCAAGCTCACTCATAACTGCCTCAACTTTGACTTCATCGGCA
CTTCCACTGATGAGTCCTCAGACGACCTGTGTACAGTGCAGATTCCCACCAGCTGGAGATCAGCCTTCTT
AGATTCTTCAACCTTGCAGCTGTTTTTTGACCTGTATCATTCCATCCCTCCTTCATTTTCACCTCTGGTA
TTATCCTGCTTGGTACAGATCGCTTCAGTCAGAAGATCCCTGTTTAACAATGCAGAGAGGGCCAAGTTTC
TCTCTCATCTTGTTGATGGTGTTAAACGAATACTGGAAAACCCACAGAGTTTATCAGACCCAAACAATTA
CCATGAGTTTTGCAGACTACTGGCCCGATTGAAGAGTAACTATCAACTGGGAGAATTGGTAAAGGTGGAA
AACTACCCTGAGGTCATCCGATTGATAGCCAACTTCACAGTGACCAGCCTACAGCACTGGGAATTTGCTC
CAAATAGTGTGCACTATCTTCTGAGCCTGTGGCAGCGGCTGGCAGCCTCTGTGCCGTATGTCAAAGCCAC
AGAGCCCCACATGCTGGAAACTTACACTCCTGAGGTCACCAAAGCCTACATCACATCCCGGTTGGAATCT
GTGCACATCATACTGAGAGATGGCCTGGAAGATCCCCTGGAGGATACGGGGCTGGTCCAGCAGCAGTTGG
ACCAGCTGTCCACCATTGGGCGTTGTGAATATGAGAAGACGTGTGCACTCCTCGTGCAGTTGTTTGACCA
GTCGGCCCAGTCGTACCAGGAGCTGCTACAGAGCGCCAGCGCAAGCCCAATGGACATTGCAGTGCAGGAG
GGAAGGCTGACATGGCTGGTTTACATTATTGGAGCAGTGATCGGTGGCCGGGTTTCTTTTGCCAGCACTG
ATGAGCAAGACGCCATGGATGGTGAGCTTGTCTGTCGGGTGCTCCAGCTGATGAACCTAACAGATTCTCG
TTTGGCCCAGGCGGGTAATGAGAAGCTAGAGTTGGCCATGCTGAGCTTTTTTGAACAGTTTCGTAAGATC
TACATTGGGGACCAAGTGCAGAAATCCTCTAAGCTGTACCGCCGACTCTCAGAAGTTCTGGGCTTGAATG
ATGAGACCATGGTCCTAAGCGTCTTCATAGGAAAAATCATCACCAACTTGAAGTACTGGGGCCGTTGTGA
ACCAATCACCTCCAAGACACTACAGCTTCTCAATGACCTGTCCATTGGGTACAGTAGCGTAAGGAAGCTA
GTGAAGCTTAGTGCGGTACAGTTCATGCTGAACAATCACACGAGCGAGCACTTTTCATTTTTGGGTATTA
ACAATCAGTCCAACCTGACAGACATGCGGTGTCGGACTACCTTCTACACAGCACTTGGGCGTCTCCTCAT
GGTGGATTTAGGAGAGGATGAAGATCAGTATGAGCAGTTCATGCTGCCACTCACAGCAGCATTTGAGGCT
GTGGCCCAGATGTTTAGCACCAATAGTTTCAACGAGCAGGAGGCAAAGCGAACTCTAGTTGGCCTAGTAA
GAGACCTGAGAGGGATCGCTTTCGCTTTCAATGCCAAGACCAGCTTCATGATGCTCTTTGAATGGATATA
TCCATCCTATATGCCAATTCTCCAACGGGCAATTGAGCTCTGGTACCATGATCCAGCCTGTACTACACCT
GTACTCAAGTTGATGGCTGAATTGGTTCATAATAGGTCCCAGCGACTCCAGTTTGATGTCTCTTCCCCCA
ATGGCATCTTACTCTTCCGAGAAACCAGCAAGATGATAACAATGTATGGCAATCGCATCCTGACACTAGG
AGAGGTCCCAAAGGATCAGGTCTATGCTCTGAAGCTCAAGGGCATCTCCATCTGCTTCTCCATGCTGAAG
GCTGCTCTCAGTGGGAGTTACGTCAATTTCGGAGTCTTTCGTCTCTATGGAGACGATGCCCTGGACAATG
CTCTGCAGACCTTCATCAAGCTGCTCCTCTCTATTCCTCACAGTGATCTCTTGGATTACCCCAAGCTCAG
CCAGTCTTATTATTCACTACTGGAAGTCCTGACCCAGGACCATATGAACTTTATTGCAAGCCTGGAACCT
CACGTCATCATGTATATTCTCTCTTCCATTTCTGAAGGACTTACTGCACTTGACACCATGGTATGCACAG
GCTGCTGCTCCTGCCTGGACCACATTGTGACATACCTCTTCAAGCAGCTGTCACGTAGCACCAAGAAGAG
GACCACACCCCTGAACCAGGAGAGCGACCGCTTTCTGCACATCATGCAGCAGCATCCAGAGATGATCCAG
CAGATGCTGTCCACGGTGCTGAACATCATCATCTTTGAAGACTGTAGGAACCAGTGGTCTATGTCCCGAC
CACTACTTGGCTTGATATTGCTTAATGAAAAGTATTTTTCTGACCTAAGAAACAGTATTGTGAACAGCCA
GCCACCGGAGAAGCAGCAGGCCATGCACCTGTGTTTTGAGAACCTGATGGAAGGCATCGAGCGAAATCTT
CTTACGAAAAACAGAGACAGGTTCACCCAGAACCTGTCAGCATTCCGTCGAGAAGTCAACGACTCAATGA
AGAATTCCACTTATGGCGTGAATAGCAATGACATGATGAGCTGA

Translation (1087 aa):
MADHVQSLAQLENLCKQLYETTDTTTRLQAEKALVEFTNSPDCLSKCQLLLERGSSSYSQLLAATCLTKL
VSRTNNPLPLEQRIDIRNYVLNYLATRPKLATFVTQALIQLYARITKLGWFDCQKDDYVFRNAITDVTRF
LQDSVEYCIIGVTILSQLTNEINQADTTHPLTKHRKIASSFRDSSLFDIFTLSCNLLKQASGKNLNLNDE
SQHGLLMQLLKLTHNCLNFDFIGTSTDESSDDLCTVQIPTSWRSAFLDSSTLQLFFDLYHSIPPSFSPLV
LSCLVQIASVRRSLFNNAERAKFLSHLVDGVKRILENPQSLSDPNNYHEFCRLLARLKSNYQLGELVKVE
NYPEVIRLIANFTVTSLQHWEFAPNSVHYLLSLWQRLAASVPYVKATEPHMLETYTPEVTKAYITSRLES
VHIILRDGLEDPLEDTGLVQQQLDQLSTIGRCEYEKTCALLVQLFDQSAQSYQELLQSASASPMDIAVQE
GRLTWLVYIIGAVIGGRVSFASTDEQDAMDGELVCRVLQLMNLTDSRLAQAGNEKLELAMLSFFEQFRKI
YIGDQVQKSSKLYRRLSEVLGLNDETMVLSVFIGKIITNLKYWGRCEPITSKTLQLLNDLSIGYSSVRKL
VKLSAVQFMLNNHTSEHFSFLGINNQSNLTDMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFEA
VAQMFSTNSFNEQEAKRTLVGLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMPILQRAIELWYHDPACTTP
VLKLMAELVHNRSQRLQFDVSSPNGILLFRETSKMITMYGNRILTLGEVPKDQVYALKLKGISICFSMLK
AALSGSYVNFGVFRLYGDDALDNALQTFIKLLLSIPHSDLLDYPKLSQSYYSLLEVLTQDHMNFIASLEP
HVIMYILSSISEGLTALDTMVCTGCCSCLDHIVTYLFKQLSRSTKKRTTPLNQESDRFLHIMQQHPEMIQ
QMLSTVLNIIIFEDCRNQWSMSRPLLGLILLNEKYFSDLRNSIVNSQPPEKQQAMHLCFENLMEGIERNL
LTKNRDRFTQNLSAFRREVNDSMKNSTYGVNSNDMMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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