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Report for CCDS32552.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32552.1 Public Homo sapiens 17 KDM6B 24 110 108 CCDS HistoryNCBI Gene:23135Re-query CCDS DB by CCDS ID:32552.1Re-query CCDS DB by GeneID:23135See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32552.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254846.9 ENSP00000254846.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000254846.9Link to Ensembl Protein Viewer:ENSP00000254846.5Re-query CCDS DB by Nucleotide ID:ENST00000254846Re-query CCDS DB by Protein ID:ENSP00000254846
Original member Current member NCBI NM_001080424.2 NP_001073893.1 Accepted alive Link to Nucleotide Sequence:NM_001080424.2Link to Protein Sequence:NP_001073893.1Re-query CCDS DB by Nucleotide ID:NM_001080424Re-query CCDS DB by Protein ID:NP_001073893Link to BLAST:NP_001073893.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073893.1 1682 O15054-1 1682 100% 0 0

Chromosomal Locations for CCDS 32552.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7845555 7845691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7845872 7845970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7846078 7846297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7846400 7846492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7846579 7846740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7846819 7847016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7847105 7847452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7847546 7849728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7849821 7849947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7850072 7850177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7851021 7851226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7851330 7851394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7851478 7851549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7851648 7851796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7851951 7852065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7852149 7852336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7852495 7852636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7853000 7853126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7853210 7853521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5049 nt):
ATGCATCGGGCAGTGGACCCTCCAGGGGCCCGCGCTGCACGGGAAGCCTTTGCCCTTGGGGGCCTGAGCT
GTGCTGGGGCCTGGAGCTCCTGCCCGCCTCATCCCCCTCCTCGTAGCGCATGGCTGCCTGGAGGCAGATG
CTCAGCCAGCATTGGGCAGCCCCCGCTTCCTGCTCCCCTACCCCCTTCACATGGCAGTAGTTCTGGGCAC
CCCAGCAAACCATATTATGCTCCAGGGGCGCCCACTCCAAGACCCCTCCATGGGAAGCTGGAATCCCTGC
ATGGCTGTGTGCAGGCATTGCTCCGGGAGCCAGCCCAGCCAGGGCTTTGGGAACAGCTTGGGCAACTGTA
CGAGTCAGAGCACGATAGTGAGGAGGCCACACGCTGCTACCACAGCGCCCTTCGATACGGAGGAAGCTTC
GCTGAGCTGGGGCCCCGCATTGGCCGACTGCAGCAGGCCCAGCTCTGGAACTTTCATACTGGCTCCTGCC
AGCACCGAGCCAAGGTCCTGCCCCCACTGGAGCAAGTGTGGAACTTGCTACACCTTGAGCACAAACGGAA
CTATGGAGCCAAGCGGGGAGGTCCCCCGGTGAAGCGAGCTGCTGAACCCCCAGTGGTGCAGCCTGTGCCT
CCTGCAGCACTCTCAGGCCCCTCAGGGGAGGAGGGCCTCAGCCCTGGAGGCAAGCGAAGGAGAGGCTGCA
ACTCTGAACAGACTGGCCTTCCCCCAGGGCTGCCACTGCCTCCACCACCATTACCACCACCACCACCACC
ACCACCACCACCACCACCACCCCTGCCTGGCCTGGCTACCAGCCCCCCATTTCAGCTAACCAAGCCAGGG
CTGTGGAGTACCCTGCATGGAGATGCCTGGGGCCCAGAGCGCAAGGGTTCAGCACCCCCAGAGCGCCAGG
AGCAGCGGCACTCGCTGCCTCACCCATATCCATACCCAGCTCCAGCGTACACCGCGCACCCCCCTGGCCA
CCGGCTGGTCCCGGCTGCTCCCCCAGGCCCAGGCCCCCGCCCCCCAGGAGCAGAGAGCCATGGCTGCCTG
CCTGCCACCCGTCCCCCCGGAAGTGACCTTAGAGAGAGCAGAGTTCAGAGGTCGCGGATGGACTCCAGCG
TTTCACCAGCAGCAACCACCGCCTGCGTGCCTTACGCCCCTTCCCGGCCCCCTGGCCTCCCCGGCACCAC
CACCAGCAGCAGCAGTAGCAGCAGCAGCAACACTGGTCTCCGGGGCGTGGAGCCGAACCCAGGCATTCCC
GGCGCTGACCATTACCAAACTCCCGCGCTGGAGGTCTCTCACCATGGCCGCCTGGGGCCCTCGGCACACA
GCAGTCGGAAACCGTTCTTGGGGGCTCCCGCTGCCACTCCCCACCTATCCCTGCCACCTGGACCTTCCTC
ACCCCCTCCACCCCCCTGTCCCCGCCTCTTACGCCCCCCACCACCCCCTGCCTGGTTGAAGGGTCCGGCC
TGCCGGGCAGCCCGAGAGGATGGAGAGATCTTAGAAGAGCTCTTCTTTGGGACTGAGGGACCCCCCCGCC
CTGCCCCACCACCCCTCCCCCATCGCGAGGGCTTCTTGGGGCCTCCGGCCTCCCGCTTTTCTGTGGGCAC
TCAGGATTCTCACACCCCTCCCACTCCCCCAACCCCAACCACCAGCAGTAGCAACAGCAACAGTGGCAGC
CACAGCAGCAGCCCTGCTGGGCCTGTGTCCTTTCCCCCACCACCCTATCTGGCCAGAAGTATAGACCCCC
TTCCCCGGCCTCCCAGCCCAGCACAGAACCCCCAGGACCCACCTCTTGTACCCCTGACTCTTGCCCTGCC
TCCAGCCCCTCCTTCCTCCTGCCACCAAAATACCTCAGGAAGCTTCAGGCGCCCGGAGAGCCCCCGGCCC
AGGGTCTCCTTCCCAAAGACCCCCGAGGTGGGGCCGGGGCCACCCCCAGGCCCCCTGAGTAAAGCCCCCC
AGCCTGTGCCGCCCGGGGTTGGGGAGCTGCCTGCCCGAGGCCCTCGACTCTTTGATTTTCCCCCCACTCC
GCTGGAGGACCAGTTTGAGGAGCCAGCCGAATTCAAGATCCTACCTGATGGGCTGGCCAACATCATGAAG
ATGCTGGACGAATCCATTCGCAAGGAAGAGGAACAGCAACAACACGAAGCAGGCGTGGCCCCCCAACCCC
CGCTGAAGGAGCCCTTTGCATCTCTGCAGTCTCCTTTCCCCACCGACACAGCCCCCACCACTACTGCTCC
TGCTGTCGCCGTCACCACCACCACCACCACCACCACCACCACCACGGCCACCCAGGAAGAGGAGAAGAAG
CCACCACCAGCCCTACCACCACCACCGCCTCTAGCCAAGTTCCCTCCACCCTCTCAGCCACAGCCACCAC
CACCCCCACCCCCCAGCCCGGCCAGCCTGCTCAAATCCTTGGCCTCCGTGCTGGAGGGACAAAAGTACTG
TTATCGGGGGACTGGAGCAGCTGTTTCCACCCGGCCTGGGCCCTTGCCCACCACTCAGTATTCCCCTGGC
CCCCCATCAGGTGCTACCGCCCTGCCGCCCACCTCAGCGGCCCCTAGCGCCCAGGGCTCCCCACAGCCCT
CTGCTTCCTCGTCATCTCAGTTCTCTACCTCAGGCGGGCCCTGGGCCCGGGAGCGCAGGGCGGGCGAAGA
GCCAGTCCCGGGCCCCATGACCCCCACCCAACCGCCCCCACCCCTATCTCTGCCCCCTGCTCGCTCTGAG
TCTGAGGTGCTAGAAGAGATCAGCCGGGCTTGCGAGACCCTTGTGGAGCGGGTGGGCCGGAGTGCCACTG
ACCCAGCCGACCCAGTGGACACAGCAGAGCCAGCGGACAGTGGGACTGAGCGACTGCTGCCCCCCGCACA
GGCCAAGGAGGAGGCTGGCGGGGTGGCGGCAGTGTCAGGCAGCTGTAAGCGGCGACAGAAGGAGCATCAG
AAGGAGCATCGGCGGCACAGGCGGGCCTGTAAGGACAGTGTGGGTCGTCGGCCCCGTGAGGGCAGGGCAA
AGGCCAAGGCCAAGGTCCCCAAAGAAAAGAGCCGCCGGGTGCTGGGGAACCTGGACCTGCAGAGCGAGGA
GATCCAGGGTCGTGAGAAGTCCCGGCCCGATCTTGGCGGGGCCTCCAAGGCCAAGCCACCCACAGCTCCA
GCCCCTCCATCAGCTCCTGCACCTTCTGCCCAGCCCACACCCCCGTCAGCCTCTGTCCCTGGAAAGAAGG
CTCGGGAGGAAGCCCCAGGGCCACCGGGTGTCAGCCGGGCCGACATGCTGAAGCTGCGCTCACTTAGTGA
GGGGCCCCCCAAGGAGCTGAAGATCCGGCTCATCAAGGTAGAGAGTGGTGACAAGGAGACCTTTATCGCC
TCTGAGGTGGAAGAGCGGCGGCTGCGCATGGCAGACCTCACCATCAGCCACTGTGCTGCTGACGTCGTGC
GCGCCAGCAGGAATGCCAAGGTGAAAGGGAAGTTTCGAGAGTCCTACCTTTCCCCTGCCCAGTCTGTGAA
ACCGAAGATCAACACTGAGGAGAAGCTGCCCCGGGAAAAACTCAACCCCCCTACACCCAGCATCTATCTG
GAGAGCAAACGGGATGCCTTCTCACCTGTCCTGCTGCAGTTCTGTACAGACCCTCGAAATCCCATCACAG
TGATCCGGGGCCTGGCGGGCTCCCTGCGGCTCAACTTGGGCCTCTTCTCCACCAAGACCCTGGTGGAAGC
GAGTGGCGAACACACCGTGGAAGTTCGCACCCAGGTGCAGCAGCCCTCAGATGAGAACTGGGATCTGACA
GGCACTCGGCAGATCTGGCCTTGTGAGAGCTCCCGTTCCCACACCACCATTGCCAAGTACGCACAGTACC
AGGCCTCATCCTTCCAGGAGTCTCTGCAGGAGGAGAAGGAGAGTGAGGATGAGGAGTCAGAGGAGCCAGA
CAGCACCACTGGAACCCCTCCTAGCAGCGCACCAGACCCGAAGAACCATCACATCATCAAGTTTGGCACC
AACATCGACTTGTCTGATGCTAAGCGGTGGAAGCCCCAGCTGCAGGAGCTGCTGAAGCTGCCCGCCTTCA
TGCGGGTAACATCCACGGGCAACATGCTGAGCCACGTGGGCCACACCATCCTGGGCATGAACACGGTGCA
GCTGTACATGAAGGTGCCCGGCAGCCGAACGCCAGGCCACCAGGAGAATAACAACTTCTGCTCCGTCAAC
ATCAACATTGGCCCAGGCGACTGCGAGTGGTTCGCGGTGCACGAGCACTACTGGGAGACCATCAGCGCTT
TCTGTGATCGGCACGGCGTGGACTACTTGACGGGTTCCTGGTGGCCAATCCTGGATGATCTCTATGCATC
CAATATTCCTGTGTACCGCTTCGTGCAGCGACCCGGAGACCTCGTGTGGATTAATGCGGGGACTGTGCAC
TGGGTGCAGGCCACCGGCTGGTGCAACAACATTGCCTGGAACGTGGGGCCCCTCACCGCCTATCAGTACC
AGCTGGCCCTGGAACGATACGAGTGGAATGAGGTGAAGAACGTCAAATCCATCGTGCCCATGATTCACGT
GTCATGGAACGTGGCTCGCACGGTCAAAATCAGCGACCCCGACTTGTTCAAGATGATCAAGTTCTGCCTG
CTGCAGTCCATGAAGCACTGCCAGGTGCAACGCGAGAGCCTGGTGCGGGCAGGGAAGAAAATCGCTTACC
AGGGCCGTGTCAAGGACGAGCCAGCCTACTACTGCAACGAGTGCGATGTGGAGGTGTTTAACATCCTGTT
CGTGACAAGTGAGAATGGCAGCCGCAACACGTACCTGGTACACTGCGAGGGCTGTGCCCGGCGCCGCAGC
GCAGGCCTGCAGGGCGTGGTGGTGCTGGAGCAGTACCGCACTGAGGAGCTGGCTCAGGCCTACGACGCCT
TCACGCTGGTGAGGGCCCGGCGGGCGCGCGGGCAGCGGAGGAGGGCACTGGGGCAGGCTGCAGGGACGGG
CTTCGGGAGCCCGGCCGCGCCTTTCCCTGAGCCCCCGCCGGCTTTCTCCCCCCAGGCCCCAGCCAGCACG
TCGCGATGA

Translation (1682 aa):
MHRAVDPPGARAAREAFALGGLSCAGAWSSCPPHPPPRSAWLPGGRCSASIGQPPLPAPLPPSHGSSSGH
PSKPYYAPGAPTPRPLHGKLESLHGCVQALLREPAQPGLWEQLGQLYESEHDSEEATRCYHSALRYGGSF
AELGPRIGRLQQAQLWNFHTGSCQHRAKVLPPLEQVWNLLHLEHKRNYGAKRGGPPVKRAAEPPVVQPVP
PAALSGPSGEEGLSPGGKRRRGCNSEQTGLPPGLPLPPPPLPPPPPPPPPPPPPLPGLATSPPFQLTKPG
LWSTLHGDAWGPERKGSAPPERQEQRHSLPHPYPYPAPAYTAHPPGHRLVPAAPPGPGPRPPGAESHGCL
PATRPPGSDLRESRVQRSRMDSSVSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTGLRGVEPNPGIP
GADHYQTPALEVSHHGRLGPSAHSSRKPFLGAPAATPHLSLPPGPSSPPPPPCPRLLRPPPPPAWLKGPA
CRAAREDGEILEELFFGTEGPPRPAPPPLPHREGFLGPPASRFSVGTQDSHTPPTPPTPTTSSSNSNSGS
HSSSPAGPVSFPPPPYLARSIDPLPRPPSPAQNPQDPPLVPLTLALPPAPPSSCHQNTSGSFRRPESPRP
RVSFPKTPEVGPGPPPGPLSKAPQPVPPGVGELPARGPRLFDFPPTPLEDQFEEPAEFKILPDGLANIMK
MLDESIRKEEEQQQHEAGVAPQPPLKEPFASLQSPFPTDTAPTTTAPAVAVTTTTTTTTTTTATQEEEKK
PPPALPPPPPLAKFPPPSQPQPPPPPPPSPASLLKSLASVLEGQKYCYRGTGAAVSTRPGPLPTTQYSPG
PPSGATALPPTSAAPSAQGSPQPSASSSSQFSTSGGPWARERRAGEEPVPGPMTPTQPPPPLSLPPARSE
SEVLEEISRACETLVERVGRSATDPADPVDTAEPADSGTERLLPPAQAKEEAGGVAAVSGSCKRRQKEHQ
KEHRRHRRACKDSVGRRPREGRAKAKAKVPKEKSRRVLGNLDLQSEEIQGREKSRPDLGGASKAKPPTAP
APPSAPAPSAQPTPPSASVPGKKAREEAPGPPGVSRADMLKLRSLSEGPPKELKIRLIKVESGDKETFIA
SEVEERRLRMADLTISHCAADVVRASRNAKVKGKFRESYLSPAQSVKPKINTEEKLPREKLNPPTPSIYL
ESKRDAFSPVLLQFCTDPRNPITVIRGLAGSLRLNLGLFSTKTLVEASGEHTVEVRTQVQQPSDENWDLT
GTRQIWPCESSRSHTTIAKYAQYQASSFQESLQEEKESEDEESEEPDSTTGTPPSSAPDPKNHHIIKFGT
NIDLSDAKRWKPQLQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVN
INIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVH
WVQATGWCNNIAWNVGPLTAYQYQLALERYEWNEVKNVKSIVPMIHVSWNVARTVKISDPDLFKMIKFCL
LQSMKHCQVQRESLVRAGKKIAYQGRVKDEPAYYCNECDVEVFNILFVTSENGSRNTYLVHCEGCARRRS
AGLQGVVVLEQYRTEELAQAYDAFTLVRARRARGQRRRALGQAAGTGFGSPAAPFPEPPPAFSPQAPAST
SR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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