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Report for CCDS37092.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37092.1 Public Mus musculus 15 Ndrg1 23 108 98 CCDS HistoryNCBI Gene:17988Re-query CCDS DB by CCDS ID:37092.1Re-query CCDS DB by GeneID:17988See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37092.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000005256.13 ENSMUSP00000005256.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000005256.13Link to Ensembl Protein Viewer:ENSMUSP00000005256.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000005256Re-query CCDS DB by Protein ID:ENSMUSP00000005256
Original member Current member NCBI NM_008681.2 NP_032707.2 Accepted alive Link to Nucleotide Sequence:NM_008681.2Link to Protein Sequence:NP_032707.2Re-query CCDS DB by Nucleotide ID:NM_008681Re-query CCDS DB by Protein ID:NP_032707Link to BLAST:NP_032707.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032707.2 394 Q62433 394 100% 0 0

Chromosomal Locations for CCDS 37092.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 66930867 66931108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66933864 66933915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66936253 66936288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66937198 66937245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66937867 66937918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66938643 66938699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66940143 66940246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66942012 66942068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66943065 66943151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66944004 66944064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66944776 66944838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66946432 66946552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66948379 66948484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66959362 66959397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66960472 66960534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1185 nt):
ATGTCCCGAGAGCTACATGACGTGGACCTCGCTGAGGTGAAGCCTCTGGTGGAAAAAGGGGAGAGCATCA
CTGGTCTCCTGCAAGAGTTCGATGTTCAGGAGCAGGATATTGAGACCCTACATGGCTCCCTGCATGTCAC
CCTGTGTGGGACCCCCAAGGGCAACCGTCCTGTCATCCTCACGTATCACGACATCGGCATGAACCACAAG
ACCTGCTACAACCCCCTCTTCAACTCTGAGGACATGCAGGAGATCACACAACATTTTGCTGTCTGCCATG
TGGATGCCCCTGGCCAACAGGATGGTGCCCCTTCCTTCCCAGTGGGGTACATGTACCCCTCAATGGATCA
GTTGGCTGAAATGCTTCCTGGAGTCCTTCACCAGTTTGGGCTCAAGAGTGTCATTGGCATGGGGACAGGA
GCTGGCGCCTACATCCTGACCCGCTTCGCACTCAACAACCCTGAGATGGTAGAGGGTCTCGTGCTCATGA
ATGTGAACCCCTGTGCTGAAGGCTGGATGGACTGGGCTGCCTCTAAGATCTCAGGATGGACCCAAGCCCT
GCCTGACATGGTGGTGTCCCACCTCTTCGGCAAGGAGGAGATACACAACAACGTGGAGGTAGTGCACACG
TACCGCCAGCACATCCTCAACGACATGAACCCGAGCAACCTACACTTATTCATCAGCGCCTACAACAGCC
GGAGAGACCTGGAGATTGAGCGGCCAATGCCTGGAACCCACACTGTCACTTTGCAGTGCCCTGCTCTGCT
GGTAGTTGGAGACAACTCTCCTGCCGTGGATGCTGTGGTGGAATGCAATTCTAAATTGGACCCAACGAAG
ACCACCCTGCTCAAGATGGCAGACTGTGGAGGCCTTCCTCAGATCTCTCAGCCCGCCAAGCTTGCTGAGG
CCTTCAAGTACTTTGTGCAGGGCATGGGATACATGCCTTCTGCCAGCATGACTCGCCTGATGCGGTCCCG
CACAGCCTCTGGCTCCAGTGTCACATCCCTGGAGGGCACCCGTAGCCGCTCCCATACCAGCGAGGGCCCC
CGAAGCCGCTCGCACACCAGTGAGGGGTCCCGTAGCCGCTCCCATACCAGTGAGGATGCCCGTCTCAACA
TCACCCCCAACTCGGGTGCCACCGGAAACAATGCCGGGCCCAAGTCCATGGAGGTGTCCTGCTAA

Translation (394 aa):
MSRELHDVDLAEVKPLVEKGESITGLLQEFDVQEQDIETLHGSLHVTLCGTPKGNRPVILTYHDIGMNHK
TCYNPLFNSEDMQEITQHFAVCHVDAPGQQDGAPSFPVGYMYPSMDQLAEMLPGVLHQFGLKSVIGMGTG
AGAYILTRFALNNPEMVEGLVLMNVNPCAEGWMDWAASKISGWTQALPDMVVSHLFGKEEIHNNVEVVHT
YRQHILNDMNPSNLHLFISAYNSRRDLEIERPMPGTHTVTLQCPALLVVGDNSPAVDAVVECNSKLDPTK
TTLLKMADCGGLPQISQPAKLAEAFKYFVQGMGYMPSASMTRLMRSRTASGSSVTSLEGTRSRSHTSEGP
RSRSHTSEGSRSRSHTSEDARLNITPNSGATGNNAGPKSMEVSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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