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Report for CCDS45282.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45282.1 Public Homo sapiens 15 HACD3 24 110 108 CCDS HistoryNCBI Gene:51495Re-query CCDS DB by CCDS ID:45282.1Re-query CCDS DB by GeneID:51495See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45282.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261875.10 ENSP00000261875.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261875.10Link to Ensembl Protein Viewer:ENSP00000261875.5Re-query CCDS DB by Nucleotide ID:ENST00000261875Re-query CCDS DB by Protein ID:ENSP00000261875
Original member Current member NCBI NM_016395.4 NP_057479.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016395.4Link to Protein Sequence:NP_057479.2Re-query CCDS DB by Nucleotide ID:NM_016395Re-query CCDS DB by Protein ID:NP_057479Link to BLAST:NP_057479.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057479.2 362 Q9P035-1 362 100% 0 0

Chromosomal Locations for CCDS 45282.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 65530632 65530718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65551676 65551718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65554887 65554960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65556739 65556903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65558680 65558731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65562774 65562884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65564215 65564342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65570091 65570203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65571548 65571654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65572235 65572366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65576303 65576379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1089 nt):
ATGGAGAATCAGGTGTTGACGCCGCATGTCTACTGGGCTCAGCGACACCGCGAGCTATATCTGCGCGTGG
AGCTGAGTGACGTACAGAACCCTGCCATCAGCATCACTGAAAACGTGCTGCATTTCAAAGCTCAAGGACA
TGGTGCCAAAGGAGACAATGTCTATGAATTTCACCTGGAGTTCTTAGACCTTGTGAAACCAGAGCCTGTT
TACAAACTGACCCAGAGGCAGGTAAACATTACAGTACAGAAGAAAGTGAGTCAGTGGTGGGAGAGACTCA
CAAAGCAGGAAAAGCGACCACTGTTTTTGGCTCCTGACTTTGATCGTTGGCTGGATGAATCTGATGCGGA
AATGGAGCTCAGAGCTAAGGAAGAAGAGCGCCTAAATAAACTCCGACTGGAAAGCGAAGGCTCTCCTGAA
ACTCTTACAAACTTAAGGAAAGGATACCTGTTTATGTATAATCTTGTGCAATTCTTGGGATTCTCCTGGA
TCTTTGTCAACCTGACTGTGCGATTCTGTATCTTGGGAAAAGAGTCCTTTTATGACACATTCCATACTGT
GGCTGACATGATGTATTTCTGCCAGATGCTGGCAGTTGTGGAAACTATCAATGCAGCAATTGGAGTCACT
ACGTCACCGGTGCTGCCTTCTCTGATCCAGCTTCTTGGAAGAAATTTTATTTTGTTTATCATCTTTGGCA
CCATGGAAGAAATGCAGAACAAAGCTGTGGTTTTCTTTGTGTTTTATTTGTGGAGTGCAATTGAAATTTT
CAGGTACTCTTTCTACATGCTGACGTGCATTGACATGGATTGGAAGGTGCTCACATGGCTTCGTTACACT
CTGTGGATTCCCTTATATCCACTGGGATGTTTGGCGGAAGCTGTCTCAGTGATTCAGTCCATTCCAATAT
TCAATGAGACCGGACGATTCAGTTTCACATTGCCATATCCAGTGAAAATCAAAGTTAGATTTTCCTTTTT
TCTTCAGATTTATCTTATAATGATATTTTTAGGTTTATACATAAATTTTCGTCACCTTTATAAACAGCGC
AGACGGCGCTATGGACAAAAAAAGAAAAAGATCCACTAA

Translation (362 aa):
MENQVLTPHVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFHLEFLDLVKPEPV
YKLTQRQVNITVQKKVSQWWERLTKQEKRPLFLAPDFDRWLDESDAEMELRAKEEERLNKLRLESEGSPE
TLTNLRKGYLFMYNLVQFLGFSWIFVNLTVRFCILGKESFYDTFHTVADMMYFCQMLAVVETINAAIGVT
TSPVLPSLIQLLGRNFILFIIFGTMEEMQNKAVVFFVFYLWSAIEIFRYSFYMLTCIDMDWKVLTWLRYT
LWIPLYPLGCLAEAVSVIQSIPIFNETGRFSFTLPYPVKIKVRFSFFLQIYLIMIFLGLYINFRHLYKQR
RRRYGQKKKKIH


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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