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Report for CCDS10822.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10822.1 Public Homo sapiens 16 PDP2 24 110 108 CCDS HistoryNCBI Gene:57546Re-query CCDS DB by CCDS ID:10822.1Re-query CCDS DB by GeneID:57546See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10822.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311765.4 ENSP00000309548.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311765.4Link to Ensembl Protein Viewer:ENSP00000309548.2Re-query CCDS DB by Nucleotide ID:ENST00000311765Re-query CCDS DB by Protein ID:ENSP00000309548
Original member Current member NCBI NM_001329928.2 NP_001316857.1 Accepted alive Link to Nucleotide Sequence:NM_001329928.2Link to Protein Sequence:NP_001316857.1Re-query CCDS DB by Nucleotide ID:NM_001329928Re-query CCDS DB by Protein ID:NP_001316857Link to BLAST:NP_001316857.1
Original member Current member NCBI NM_001329929.2 NP_001316858.1 Accepted alive Link to Nucleotide Sequence:NM_001329929.2Link to Protein Sequence:NP_001316858.1Re-query CCDS DB by Nucleotide ID:NM_001329929Re-query CCDS DB by Protein ID:NP_001316858Link to BLAST:NP_001316858.1
Original member Current member NCBI NM_001329930.2 NP_001316859.1 Accepted alive Link to Nucleotide Sequence:NM_001329930.2Link to Protein Sequence:NP_001316859.1Re-query CCDS DB by Nucleotide ID:NM_001329930Re-query CCDS DB by Protein ID:NP_001316859Link to BLAST:NP_001316859.1
Original member Current member NCBI NM_001329931.2 NP_001316860.1 Accepted alive Link to Nucleotide Sequence:NM_001329931.2Link to Protein Sequence:NP_001316860.1Re-query CCDS DB by Nucleotide ID:NM_001329931Re-query CCDS DB by Protein ID:NP_001316860Link to BLAST:NP_001316860.1
Original member Current member NCBI NM_001329932.2 NP_001316861.1 Accepted alive Link to Nucleotide Sequence:NM_001329932.2Link to Protein Sequence:NP_001316861.1Re-query CCDS DB by Nucleotide ID:NM_001329932Re-query CCDS DB by Protein ID:NP_001316861Link to BLAST:NP_001316861.1
Original member Current member NCBI NM_001329933.2 NP_001316862.1 Accepted alive Link to Nucleotide Sequence:NM_001329933.2Link to Protein Sequence:NP_001316862.1Re-query CCDS DB by Nucleotide ID:NM_001329933Re-query CCDS DB by Protein ID:NP_001316862Link to BLAST:NP_001316862.1
Original member Current member NCBI NM_001329934.2 NP_001316863.1 Accepted alive Link to Nucleotide Sequence:NM_001329934.2Link to Protein Sequence:NP_001316863.1Re-query CCDS DB by Nucleotide ID:NM_001329934Re-query CCDS DB by Protein ID:NP_001316863Link to BLAST:NP_001316863.1
Original member Current member NCBI NM_020786.4 NP_065837.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020786.4Link to Protein Sequence:NP_065837.1Re-query CCDS DB by Nucleotide ID:NM_020786Re-query CCDS DB by Protein ID:NP_065837Link to BLAST:NP_065837.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001316857.1 529 Q9P2J9 529 100% 0 0
NP_001316858.1 529 Q9P2J9 529 100% 0 0
NP_001316859.1 529 Q9P2J9 529 100% 0 0
NP_001316860.1 529 Q9P2J9 529 100% 0 0
NP_001316861.1 529 Q9P2J9 529 100% 0 0
NP_001316862.1 529 Q9P2J9 529 100% 0 0
NP_001316863.1 529 Q9P2J9 529 100% 0 0
NP_065837.1 529 Q9P2J9 529 100% 0 0

Chromosomal Locations for CCDS 10822.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 66884285 66885874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1590 nt):
ATGTCAAGTACTGTGTCCTACTGGATCTTAAATTCTACAAGGAACAGCATTGCCACATTGCAAGGGGGTA
GACGCTTATACTCCAGGTATGTCTCAAATAGGAATAAATTAAAATGGAGGCTCTTTTCCCGGGTGCCACC
CACCCTAAACAGTTCCCCATGTGGTGGCTTTACTCTGTGCAAAGCCTACAGACACACATCAACAGAGGAA
GATGATTTTCACTTGCAACTCAGCCCTGAGCAGATAAATGAAGTGCTTCGAGCTGGCGAGACAACCCACA
AGATTCTTGACCTTGAAAGCAGAGTCCCAAATTCAGTGTTGCGGTTTGAGAGCAACCAGCTGGCTGCCAA
TTCCCCAGTGGAGGACCGGCGAGGTGTAGCCTCCTGCCTGCAAACCAATGGACTGATGTTTGGCATCTTC
GATGGACATGGTGGTCATGCATGTGCCCAAGCAGTGAGCGAGAGGCTCTTCTACTATGTGGCAGTGTCCC
TGATGTCCCACCAGACCCTGGAGCACATGGAGGGAGCTATGGAAAGCATGAAACCCTTGCTGCCCATCCT
GCATTGGCTCAAGCACCCAGGGGACAGTATCTACAAGGATGTCACATCTGTGCATCTTGACCACCTCCGT
GTCTATTGGCAGGAACTGCTTGATTTGCACATGGAAATGGGACTAAGCATTGAAGAAGCATTAATGTACT
CCTTCCAGAGACTGGATTCTGACATCTCGCTGGAAATCCAGGCCCCCCTGGAAGATGAGGTGACAAGGAA
CCTGTCACTCCAGGTTGCTTTCTCTGGGGCAACAGCTTGCATGGCCCATGTTGATGGAATTCACTTGCAC
GTGGCAAATGCTGGTGACTGCCGAGCCATCCTTGGTGTCCAAGAGGACAATGGCATGTGGTCTTGTCTGC
CCCTTACACGTGACCACAATGCCTGGAACCAGGCCGAGCTGTCCCGGCTAAAGAGGGAGCACCCTGAGTC
AGAGGACAGGACGATCATCATGGAGGACAGGCTACTGGGCGTCCTCATCCCCTGCAGGGCCTTTGGGGAT
GTTCAGCTGAAGTGGAGTAAAGAGTTGCAGCGCAGCATTCTGGAGAGGGGCTTCAATACCGAGGCCCTCA
ACATTTACCAGTTCACACCCCCACACTACTACACTCCACCCTACCTGACTGCTGAGCCTGAGGTCACATA
CCACAGGCTGAGGCCCCAGGATAAGTTCCTTGTGCTGGCCTCAGATGGCCTGTGGGACATGCTGAGCAAT
GAGGACGTGGTAAGGCTGGTGGTGGGGCACCTGGCTGAGGCAGATTGGCACAAGACAGACCTGGCCCAGA
GACCCGCCAACTTGGGGCTCATGCAGAGCCTGCTGCTGCAGAGGAAAGCCAGCGGGCTCCACGAGGCTGA
CCAAAATGCAGCCACGCGGCTGATCAGACATGCCATCGGGAACAATGAGTATGGGGAGATGGAGGCAGAG
CGGCTGGCGGCGATGCTGACATTGCCAGAGGACTTGGCGAGGATGTACAGGGATGATATCACTGTCACTG
TGGTGTATTTTAACTCAGAATCAATCGGTGCATATTACAAGGGGGGTTAA

Translation (529 aa):
MSSTVSYWILNSTRNSIATLQGGRRLYSRYVSNRNKLKWRLFSRVPPTLNSSPCGGFTLCKAYRHTSTEE
DDFHLQLSPEQINEVLRAGETTHKILDLESRVPNSVLRFESNQLAANSPVEDRRGVASCLQTNGLMFGIF
DGHGGHACAQAVSERLFYYVAVSLMSHQTLEHMEGAMESMKPLLPILHWLKHPGDSIYKDVTSVHLDHLR
VYWQELLDLHMEMGLSIEEALMYSFQRLDSDISLEIQAPLEDEVTRNLSLQVAFSGATACMAHVDGIHLH
VANAGDCRAILGVQEDNGMWSCLPLTRDHNAWNQAELSRLKREHPESEDRTIIMEDRLLGVLIPCRAFGD
VQLKWSKELQRSILERGFNTEALNIYQFTPPHYYTPPYLTAEPEVTYHRLRPQDKFLVLASDGLWDMLSN
EDVVRLVVGHLAEADWHKTDLAQRPANLGLMQSLLLQRKASGLHEADQNAATRLIRHAIGNNEYGEMEAE
RLAAMLTLPEDLARMYRDDITVTVVYFNSESIGAYYKGG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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