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Report for CCDS82339.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82339.1 Public Homo sapiens 19 ZNF875 24 110 108 CCDS HistoryNCBI Gene:284459Re-query CCDS DB by CCDS ID:82339.1Re-query CCDS DB by GeneID:284459See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82339.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000541583.6 ENSP00000438261.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541583.6Link to Ensembl Protein Viewer:ENSP00000438261.1Re-query CCDS DB by Nucleotide ID:ENST00000541583Re-query CCDS DB by Protein ID:ENSP00000438261
Original member Current member NCBI NM_001329774.2 NP_001316703.1 Accepted alive Link to Nucleotide Sequence:NM_001329774.2Link to Protein Sequence:NP_001316703.1Re-query CCDS DB by Nucleotide ID:NM_001329774Re-query CCDS DB by Protein ID:NP_001316703Link to BLAST:NP_001316703.1
Original member Current member NCBI NM_001329775.2 NP_001316704.1 Accepted alive Link to Nucleotide Sequence:NM_001329775.2Link to Protein Sequence:NP_001316704.1Re-query CCDS DB by Nucleotide ID:NM_001329775Re-query CCDS DB by Protein ID:NP_001316704Link to BLAST:NP_001316704.1
Original member Current member NCBI NM_001329776.2 NP_001316705.1 Accepted alive Link to Nucleotide Sequence:NM_001329776.2Link to Protein Sequence:NP_001316705.1Re-query CCDS DB by Nucleotide ID:NM_001329776Re-query CCDS DB by Protein ID:NP_001316705Link to BLAST:NP_001316705.1
Original member Current member NCBI NM_001329777.2 NP_001316706.1 Accepted alive Link to Nucleotide Sequence:NM_001329777.2Link to Protein Sequence:NP_001316706.1Re-query CCDS DB by Nucleotide ID:NM_001329777Re-query CCDS DB by Protein ID:NP_001316706Link to BLAST:NP_001316706.1
Original member Current member NCBI NM_001329778.2 NP_001316707.1 Accepted alive Link to Nucleotide Sequence:NM_001329778.2Link to Protein Sequence:NP_001316707.1Re-query CCDS DB by Nucleotide ID:NM_001329778Re-query CCDS DB by Protein ID:NP_001316707Link to BLAST:NP_001316707.1

Chromosomal Locations for CCDS 82339.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37347283 37347316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37347777 37347872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37362109 37363775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1797 nt):
ATGCTGGAGACTTATAACCATCTGGTCTCACTGGAAATTCCATCTTCTAAACCAAAACTCATTGCTCAGC
TGGAGCGAGGGGAAGCGCCCTGGAGAGAGGAGAGAAAATGTCCACTGGACCTCTGTCCAGAATCGAAGCC
AGAAATTCAACTTAGTCCCTCCTGCCCTCTGATTTTCTCCAGTCAGCAAGCTCTCAGCCAACATGTGTGG
CTGAGTCATCTCTCTCAGCTGTTTTCAAGTTTATGGGCAGGAAATCCTCTCCACCTGGGAAAACACTATC
CAGAAGATCAGAAACAACAGCAGGATCCATTCTGCTTTAGTGGCAAAGCAGAATGGATTCAAGAGGGAGA
AGACTCCAGACTCCTGTTTGGGAGAGTAAGCAAAAATGGCACTTCAAAGGCACTTTCCAGCCCACCTGAA
GAACAACAGCCAGCACAGTCCAAGGAAGACAACACAGTGGTGGATATAGGGTCCAGCCCTGAACGGAGGG
CAGATCTAGAGGAAACAGACAAAGTATTGCATGGTTTAGAAGTCTCAGGATTTGGAGAAATCAAATATGA
AGAGTTTGGGCCAGGCTTTATCAAGGAGTCAAACCTCCTTAGCCTCCAGAAGACACAAACTGGGGAGACA
CCTTACATGTACACTGAGTGGGGAGACAGCTTTGGCAGTATGTCAGTCCTCATCAAAAACCCAAGGACAC
ACTCTGGGGGAAAGCCTTATGTGTGCAGGGAATGTGGGCGAGGCTTTACGTGGAAGTCAAACCTGATCAC
ACATCAGAGGACACACTCAGGGGAGAAACCTTATGTGTGCAAGGATTGTGGACGAGGCTTTACTTGGAAG
TCGAACCTCTTTACACATCAGCGGACACACTCAGGGCTCAAGCCTTATGTGTGCAAGGAATGTGGGCAGA
GCTTTAGCCTGAAGTCAAACCTCATTACCCACCAGAGGGCGCACACTGGGGAGAAGCCTTATGTTTGCAG
GGAATGTGGGCGTGGCTTTCGCCAGCATTCACACCTGGTCAGACACAAGAGGACACATTCAGGAGAGAAG
CCTTACATTTGCAGGGAGTGTGAGCAAGGCTTTAGCCAGAAGTCACACCTCATCAGACACTTAAGGACAC
ACACAGGAGAGAAGCCTTATGTATGCACAGAATGTGGGCGTCACTTTAGCTGGAAATCAAACCTCAAAAC
ACACCAGAGGACACACTCAGGGGTTAAACCTTATGTCTGCCTGGAGTGCGGGCAGTGCTTTAGCCTGAAG
TCAAACCTTAACAAACACCAGAGGTCACACACGGGGGAGAAGCCATTTGTATGTACGGAGTGTGGGCGAG
GCTTTACCCGGAAATCAACCCTGAGCACGCACCAGAGGACACACTCAGGGGAGAAGCCATTTGTATGTGC
TGAGTGTGGACGAGGCTTTAATGATAAGTCCACCCTCATTTCACACCAGAGGACACATTCAGGGGAAAAG
CCTTTTATGTGCAGGGAGTGTGGCAGAAGGTTTCGGCAGAAGCCTAACCTGTTTAGGCACAAGAGGGCAC
ACTCAGGTGCCTTTGTGTGCAGGGAGTGTGGGCAAGGCTTTTGTGCTAAGTTAACTCTCATTAAACACCA
GAGAGCACACGCAGGGGGGAAGCCTCATGTGTGCAGGGAGTGTGGGCAAGGCTTTAGCCGGCAGTCACAC
CTCATTAGACACCAGAGGACACATTCAGGAGAGAAGCCTTATATTTGCAGAAAGTGTGGACGGGGCTTTA
GTCGGAAGTCCAACCTTATCAGACATCAGAGGACACACTCAGGATAG

Translation (598 aa):
MLETYNHLVSLEIPSSKPKLIAQLERGEAPWREERKCPLDLCPESKPEIQLSPSCPLIFSSQQALSQHVW
LSHLSQLFSSLWAGNPLHLGKHYPEDQKQQQDPFCFSGKAEWIQEGEDSRLLFGRVSKNGTSKALSSPPE
EQQPAQSKEDNTVVDIGSSPERRADLEETDKVLHGLEVSGFGEIKYEEFGPGFIKESNLLSLQKTQTGET
PYMYTEWGDSFGSMSVLIKNPRTHSGGKPYVCRECGRGFTWKSNLITHQRTHSGEKPYVCKDCGRGFTWK
SNLFTHQRTHSGLKPYVCKECGQSFSLKSNLITHQRAHTGEKPYVCRECGRGFRQHSHLVRHKRTHSGEK
PYICRECEQGFSQKSHLIRHLRTHTGEKPYVCTECGRHFSWKSNLKTHQRTHSGVKPYVCLECGQCFSLK
SNLNKHQRSHTGEKPFVCTECGRGFTRKSTLSTHQRTHSGEKPFVCAECGRGFNDKSTLISHQRTHSGEK
PFMCRECGRRFRQKPNLFRHKRAHSGAFVCRECGQGFCAKLTLIKHQRAHAGGKPHVCRECGQGFSRQSH
LIRHQRTHSGEKPYICRKCGRGFSRKSNLIRHQRTHSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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