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Report for CCDS84822.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84822.1 Public Mus musculus 4 Zfp990 23 108 98 CCDS HistoryNCBI Gene:101056073Re-query CCDS DB by CCDS ID:84822.1Re-query CCDS DB by GeneID:101056073See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84822.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105741.1 ENSMUSP00000101367.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105741.1Link to Ensembl Protein Viewer:ENSMUSP00000101367.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000105741Re-query CCDS DB by Protein ID:ENSMUSP00000101367
Original member Current member EBI ENSMUST00000105742.7 ENSMUSP00000101368.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105742.7Link to Ensembl Protein Viewer:ENSMUSP00000101368.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000105742Re-query CCDS DB by Protein ID:ENSMUSP00000101368
Original member Current member NCBI NM_001324553.1 NP_001311482.1 Accepted alive Link to Nucleotide Sequence:NM_001324553.1Link to Protein Sequence:NP_001311482.1Re-query CCDS DB by Nucleotide ID:NM_001324553Re-query CCDS DB by Protein ID:NP_001311482Link to BLAST:NP_001311482.1

Chromosomal Locations for CCDS 84822.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 145530886 145530915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145534816 145534942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145536591 145538251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1818 nt):
ATGAGTGTGTATCTGGTAAATACACCACAGGGTCTGTTAACTTTCAAGGACGTGGCCTTGGACTTCTCAC
TGGAGGAATGGGAATGTCTCAATTTTGCTCAGAGGAGACTGTACATGGATGTGATGTTGGAGAATTACAA
CAATCTGTTGTTCGTGGAAAATCATTGCATACGTGGAAAGAATGGGAAGGTATTGGATCAAGACAGCCAG
TACATTGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAATGGGACAAGCTTAGCAATGTGATTC
TTGAATCCCTCCAGTGTACACCTTACAAAACTAATCACAGCTCTGACTCTCTTCAATACTCGAACCAAAA
AAGACTTAAACCCAGGAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAACAGTTTAAGTTTGTTT
TCTACCATTAGTGTCAATCAAGGAATTTACATGCAGAAGAAAAAACACAACCGAAATGCAGAATTAGAGA
AGGTTTTTGTTTCTAAACATAAAGTCATGGTGAAACGAAACAATATTGGAGGGAACCCTTACAAATGTAG
TGAATTTCACAAATATCTTACCCAGAGAGAAAAACTACAAAGTCAGCAGAGAATTTATCATGGAAAGAAA
CCTTACGAAAGTAGTAAAAGTGACAAATGCCTTACCCATCAGATCCATCTTAGTATTCATCAGGGAATTC
ATACAGAAGAGATAATTTACAAATGTAGTGAATGTGACAAATGTTTTAAACACAAATTCAATCTTACTAT
GCATCAGAGAATTCATAAAGGAGAGACACCTCACAAATGTAGTCAATGTGACAAATGCTTTACCCACAAC
TTTAATTTGAGAATCCATCAGAGAATTCATACAGGAGAGAAATCTTACAAATGTAGTGAATGTGACAAAT
GCTTTACCCGAAAATTCCATCTTGGTATTCATCAGAGAATTCATACAGGAGAGAAACCGTACAAATGTAG
TGAATGTGACAAATCCTTTACCCACAAATCCCATCTTAATAATCATCAGAGAATTCATACAGGAGAGAAA
CCTTACAAATGCAGTGAATGTGACAAATGCTTTACTGAAAAAGGCAGTCTGAGAATTCATCAGAGAATTC
ATACAGGAGAGAAACCTTACAAATGCAGTGGATGTGACAAATGCTTTACTCAAAAAAGCAGTCTGAGAAT
TCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGTAGTGAATGTGACATATGCTTTACTACAAAA
GGCAATCTGATAATTCATCAGAGAATTCATACAAGAGAGAAACCTTACAAATGTAGTGAATGTGACAAAT
GCTTTACCCACAAATGCCATCTTAATAATCATCAGAAAATTCATACAGGAGAGAAACCTTACAAATGCAG
TGAATGTGACAAATGCTTTACTGAAAAAGGCAGTCTGAGAATTCATCAGAGAATTCATACAGGAGAGAAA
CCTTACAAATGCAGTGGATGTGACAAATGCTTTACTCAAAAAAGCAGTCTGAGAATTCATCAGAGAATTC
ACACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACTAAAAAAGGCAATCTGATAAT
TCATCAGAGAATTCATATAAGAGAGAAACCTCACAAATGTAGTGAATGTGACAAATGCTTTACCCAAAAA
TCCTATCTTAATATTCATCAGAAAATTCATACAGGAGAGAAACTTTACAAATGTAGTGAATGTGACAAAT
GCTTTACCCGAAAATCCCATCTTGGTATTCATCAGAAAATTCATACAGGAGAGAAACCTTACAAATAG

Translation (605 aa):
MSVYLVNTPQGLLTFKDVALDFSLEEWECLNFAQRRLYMDVMLENYNNLLFVENHCIRGKNGKVLDQDSQ
YIVHEHMNIQEKSSKWDKLSNVILESLQCTPYKTNHSSDSLQYSNQKRLKPRNTKEVCKYNDSVNSLSLF
STISVNQGIYMQKKKHNRNAELEKVFVSKHKVMVKRNNIGGNPYKCSEFHKYLTQREKLQSQQRIYHGKK
PYESSKSDKCLTHQIHLSIHQGIHTEEIIYKCSECDKCFKHKFNLTMHQRIHKGETPHKCSQCDKCFTHN
FNLRIHQRIHTGEKSYKCSECDKCFTRKFHLGIHQRIHTGEKPYKCSECDKSFTHKSHLNNHQRIHTGEK
PYKCSECDKCFTEKGSLRIHQRIHTGEKPYKCSGCDKCFTQKSSLRIHQRIHTGEKPYKCSECDICFTTK
GNLIIHQRIHTREKPYKCSECDKCFTHKCHLNNHQKIHTGEKPYKCSECDKCFTEKGSLRIHQRIHTGEK
PYKCSGCDKCFTQKSSLRIHQRIHTGEKPYKCSECDKCFTKKGNLIIHQRIHIREKPHKCSECDKCFTQK
SYLNIHQKIHTGEKLYKCSECDKCFTRKSHLGIHQKIHTGEKPYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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