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Report for CCDS94549.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94549.1 Public Homo sapiens X MID1 24 110 108 CCDS HistoryNCBI Gene:4281Re-query CCDS DB by CCDS ID:94549.1Re-query CCDS DB by GeneID:4281See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94549.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000690004.1 ENSP00000509730.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000690004.1Link to Ensembl Protein Viewer:ENSP00000509730.1Re-query CCDS DB by Nucleotide ID:ENST00000690004Re-query CCDS DB by Protein ID:ENSP00000509730
Original member Current member EBI ENST00000689773.1 ENSP00000509925.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000689773.1Link to Ensembl Protein Viewer:ENSP00000509925.1Re-query CCDS DB by Nucleotide ID:ENST00000689773Re-query CCDS DB by Protein ID:ENSP00000509925
Original member Current member NCBI NM_033289.2 NP_150631.1 Accepted alive Link to Nucleotide Sequence:NM_033289.2Link to Protein Sequence:NP_150631.1Re-query CCDS DB by Nucleotide ID:NM_033289Re-query CCDS DB by Protein ID:NP_150631Link to BLAST:NP_150631.1

Chromosomal Locations for CCDS 94549.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 10449368 10449716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10454870 10455077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10459646 10459807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10469697 10469840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10474623 10474750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10482480 10482628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10495584 10495691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10523092 10523187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 10567002 10567547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1890 nt):
ATGGAAACACTGGAGTCAGAACTGACCTGCCCTATTTGTCTGGAGCTCTTTGAGGACCCTCTTCTACTGC
CCTGCGCACACAGCCTCTGCTTCAACTGCGCCCACCGCATCCTAGTATCACACTGTGCCACCAACGAGTC
TGTGGAGTCCATCACCGCCTTCCAGTGCCCCACCTGCCGGCATGTCATCACCCTCAGCCAGCGAGGTCTA
GACGGGCTCAAGCGCAACGTCACCCTACAGAACATCATCGACAGGTTCCAGAAAGCATCAGTGAGCGGGC
CCAACTCTCCCAGCGAGACCCGTCGGGAGCGGGCCTTTGACGCCAACACCATGACCTCCGCCGAGAAGGT
CCTCTGCCAGTTTTGTGACCAGGATCCTGCCCAGGACGCTGTGAAGACCTGTGTCACTTGTGAAGTATCC
TACTGTGACGAGTGCCTGAAAGCCACTCACCCGAATAAGAAGCCCTTTACAGGCCATCGTCTGATTGAGC
CAATTCCGGACTCTCACATCCGGGGGCTGATGTGCTTGGAGCATGAGGATGAGAAGCAAAACTTAGAGAG
TAACCTCACCAACCTTATTAAGAGGAACACAGAACTGGAGACCCTTTTGGCTAAACTCATCCAAACCTGT
CAACATGTTGAAGTCAATGCATCACGTCAAGAAGCCAAATTGACAGAGGAGTGTGATCTTCTCATTGAGA
TCATTCAGCAAAGACGACAGATTATTGGAACCAAGATCAAAGAAGGGAAGGTGATGAGGCTTCGCAAACT
GGCTCAGCAGATTGCAAACTGCAAACAGTGCATTGAGCGGTCAGCATCACTCATCTCCCAAGCGGAACAC
TCTCTGAAGGAGAATGATCATGCGCGTTTCCTACAGACTGCTAAGAATATCACCGAGAGAGTCTCCATGG
CAACTGCATCCTCCCAGGTTCTAATTCCTGAAATCAACCTCAATGACACATTTGACACCTTTGCCTTAGA
TTTTTCCCGAGAGAAGAAACTGCTAGAATGTCTGGATTACCTTACAGCTCCCAACCCTCCCACAATTAGA
GAAGAGCTCTGCACAGCTTCATATGACACCATCACTGTGCATTGGACCTCCGATGATGAGTTCAGCGTGG
TCTCCTACGAGCTCCAGTACACCATATTCACCGGACAAGCCAACGTCGTTAGTCTGTGTAATTCGGCTGA
TAGCTGGATGATAGTACCCAACATCAAGCAGAACCACTACACGGTGCACGGTCTGCAGAGCGGCACCAAG
TACATCTTCATGGTCAAGGCCATCAACCAGGCGGGCAGCCGCAGCAGTGAGCCTGGGAAGTTGAAGACAA
ACAGCCAACCATTTAAACTGGATCCCAAATCTGCTCATCGAAAACTGAAGGTGTCCCATGATAACTTGAC
AGTAGAACGTGATGAGTCATCATCCAAGAAGAGTCACACACCTGAACGCTTCACCAGCCAGGGGAGCTAT
GGAGTAGCTGGAAATGTGTTTATTGATAGTGGCCGGCATTATTGGGAAGTGGTCATAAGTGGAAGCACAT
GGTATGCCATTGGTCTTGCTTACAAATCAGCCCCGAAGCATGAATGGATTGGGAAGAACTCTGCTTCCTG
GGCGCTCTGCCGCTGCAACAATAACTGGGTGGTGAGACACAATAGCAAGGAAATCCCCATTGAGCCTGCC
CCCCACCTCCGGCGCGTGGGCATCCTGCTGGACTATGATAACGGCTCTATCGCCTTTTATGATGCTTTGA
ACTCCATCCACCTCTACACCTTCGACGTCGCATTTGCGCAGCCTGTTTGCCCCACCTTCACCGTGTGGAA
CAAGTGTCTGACGATTATCACTGGGCTCCCTATCCCAGACCATTTGGACTGCACAGAGCAGCTGCCGTGA

Translation (629 aa):
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCRHVITLSQRGL
DGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSAEKVLCQFCDQDPAQDAVKTCVTCEVS
YCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHEDEKQNLESNLTNLIKRNTELETLLAKLIQTC
QHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIANCKQCIERSASLISQAEH
SLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFDTFALDFSREKKLLECLDYLTAPNPPTIR
EELCTASYDTITVHWTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTK
YIFMVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSY
GVAGNVFIDSGRHYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWVVRHNSKEIPIEPA
PHLRRVGILLDYDNGSIAFYDALNSIHLYTFDVAFAQPVCPTFTVWNKCLTIITGLPIPDHLDCTEQLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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