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Report for CCDS58658.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58658.1 Public Homo sapiens 19 URI1 24 110 108 CCDS HistoryNCBI Gene:8725Re-query CCDS DB by CCDS ID:58658.1Re-query CCDS DB by GeneID:8725See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58658.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360605.8 ENSP00000353817.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360605.8Link to Ensembl Protein Viewer:ENSP00000353817.4Re-query CCDS DB by Nucleotide ID:ENST00000360605Re-query CCDS DB by Protein ID:ENSP00000353817
Original member Current member NCBI NM_001252641.2 NP_001239570.1 Accepted alive Link to Nucleotide Sequence:NM_001252641.2Link to Protein Sequence:NP_001239570.1Re-query CCDS DB by Nucleotide ID:NM_001252641Re-query CCDS DB by Protein ID:NP_001239570Link to BLAST:NP_001239570.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001239570.1 475 O94763-4 475 100% 0 0

Chromosomal Locations for CCDS 58658.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 29923692 29923754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29971193 29971227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29985223 29985301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29986282 29986417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30005361 30005452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30005651 30005708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30007470 30007638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30009005 30009353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30011094 30011236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30012285 30012531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 30015536 30015592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1428 nt):
ATGACAACATGGTCTTCCCTTCAAGGAAGCCACGTTTCTAAGAGGGCTCTGGCATATGCATTGGTGGTCA
CTAACTGCCAAGAGAGAATCCAGCATTGGAAGAAGGTAGATAATGACTATAATGCCCTTCGAGAAAGACT
CAGCACCTTGCCTGATAAATTGTCTTATAATATAATGGTACCATTTGGCCCTTTTGCCTTCATGCCAGGA
AAACTTGTCCATACTAATGAAGTCACTGTTTTACTGGGGGACAACTGGTTTGCAAAGTGCTCAGCAAAGC
AGGCTGTAGGTTTAGTTGAGCACCGGAAAGAACATGTAAGAAAAACAATAGATGACTTAAAAAAAGTGAT
GAAAAATTTTGAATCCAGAGTTGAATTCACAGAAGATTTGCAGAAAATGAGCGATGCTGCAGGTGATATT
GTTGACATACGAGAAGAAATTAAATGTGACTTCGAATTTAAAGCAAAACACCGAATTGCTCATAAACCGC
ATTCCAAACCAAAAACTTCAGATATTTTTGAAGCAGATATTGCAAATGATGTGAAATCCAAGGATTTGCT
AGCTGATAAAGAACTGTGGGCTCGACTTGAAGAACTAGAGAGACAGGAAGAATTGCTGGGTGAACTTGAT
AGTAAGCCTGATACTGTGATTGCAAATGGAGAAGATACGACATCTTCTGAAGAGGAAAAGGAAGATCGTA
ACACAAATGTGAATGCGATGCATCAAGTAACAGACTCTCATACTCCTTGTCATAAGGATGTTGCAAGTTC
AGAACCATTCAGTGGTCAAGTGAATAGTCAGTTGAACTGTTCAGTGAATGGTTCCAGTTCTTACCACAGT
GATGATGATGATGATGATGATGATGACGACGACGACGACAACATTGACGACGATGATGGTGATAACGACC
ATGAGGCTTTAGGGGTTGGAGATAATTCTATACCAACAATATATTTTTCACATACTGTTGAGCCTAAGAG
GGTCCGAATAAATACTGGAAAGAATACCACTTTAAAATTCAGTGAAAAGAAAGAAGAAGCCAAACGTAAA
CGAAAGAACAGCACTGGCAGTGGCCACTCTGCCCAGGAGCTGCCGACCATCAGGACGCCTGCAGACATTT
ACAGAGCCTTTGTTGATGTTGTGAATGGAGAATATGTCCCTCGCAAATCCATCCTGAAGTCTCGAAGTAG
AGAGAATAGTGTGTGTAGCGACACTAGTGAAAGCAGTGCTGCTGAATTTGATGATAGGCGGGGAGTTTTG
AGGAGTATCAGCTGCGAAGAAGCCACTTGCAGTGACACCAGTGAGAGCATTTTGGAAGAGGAACCACAAG
AAAATCAAAAGAAACTTTTGCCCTTATCAGTAACACCTGAGGTTTTGCGGCTAGTTGGCTATTCAAGAAA
CCTCGCCCCTCTGAATGTCATACTGTAA

Translation (475 aa):
MTTWSSLQGSHVSKRALAYALVVTNCQERIQHWKKVDNDYNALRERLSTLPDKLSYNIMVPFGPFAFMPG
KLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMKNFESRVEFTEDLQKMSDAAGDI
VDIREEIKCDFEFKAKHRIAHKPHSKPKTSDIFEADIANDVKSKDLLADKELWARLEELERQEELLGELD
SKPDTVIANGEDTTSSEEEKEDRNTNVNAMHQVTDSHTPCHKDVASSEPFSGQVNSQLNCSVNGSSSYHS
DDDDDDDDDDDDDNIDDDDGDNDHEALGVGDNSIPTIYFSHTVEPKRVRINTGKNTTLKFSEKKEEAKRK
RKNSTGSGHSAQELPTIRTPADIYRAFVDVVNGEYVPRKSILKSRSRENSVCSDTSESSAAEFDDRRGVL
RSISCEEATCSDTSESILEEEPQENQKKLLPLSVTPEVLRLVGYSRNLAPLNVIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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