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Report for CCDS20050.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20050.1 Public Mus musculus 6 Prss2 23 108 98 CCDS HistoryNCBI Gene:22072Re-query CCDS DB by CCDS ID:20050.1Re-query CCDS DB by GeneID:22072See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20050.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000070380.4 ENSMUSP00000065393.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000070380.4Link to Ensembl Protein Viewer:ENSMUSP00000065393.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000070380Re-query CCDS DB by Protein ID:ENSMUSP00000065393
Original member Current member NCBI NM_009430.2 NP_033456.1 Accepted alive Link to Nucleotide Sequence:NM_009430.2Link to Protein Sequence:NP_033456.1Re-query CCDS DB by Nucleotide ID:NM_009430Re-query CCDS DB by Protein ID:NP_033456Link to BLAST:NP_033456.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033456.1 246 P07146 246 100% 0 0

Chromosomal Locations for CCDS 20050.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 41521804 41521843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41522817 41522976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41523855 41524108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41524453 41524589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41524873 41525022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (741 nt):
ATGAGTGCACTTCTGATCCTAGCCCTTGTGGGAGCTGCTGTTGCTTTCCCTGTGGATGATGATGACAAGA
TTGTTGGAGGATACACCTGCCGAGAGAGTTCTGTCCCCTATCAGGTGTCCCTAAATGCTGGCTACCACTT
CTGTGGAGGTTCCCTCATCAATGACCAGTGGGTGGTGTCTGCAGCTCACTGCTACAAATACCGCATCCAA
GTGAGACTGGGAGAGCACAACATCAATGTCCTGGAGGGCAATGAGCAGTTTGTTGATTCTGCCAAGATCA
TCCGGCACCCCAATTATAATTCATGGACCCTGGACAATGACATCATGCTGATCAAACTGGCTTCCCCTGT
GACCCTCAATGCCAGAGTGGCCTCTGTACCTCTGCCCAGCTCCTGTGCACCTGCAGGCACTCAGTGCCTC
ATCTCTGGCTGGGGCAACACCCTCAGCAATGGTGTGAACAACCCAGACCTGCTCCAGTGTGTTGATGCCC
CAGTGCTGCCTCAGGCTGACTGTGAGGCCTCCTACCCTGGGGACATCACCAACAACATGATCTGTGTTGG
CTTCCTGGAGGGAGGCAAAGATTCCTGCCAGGGTGACTCTGGTGGCCCTGTGGTCTGCAATGGAGAGCTG
CAGGGCATTGTCTCCTGGGGCTATGGCTGTGCCCAGCCAGATGCTCCTGGTGTATACACCAAGGTCTGCA
ACTACGTGGACTGGATTCAGAACACAATTGCTGACAACTAG

Translation (246 aa):
MSALLILALVGAAVAFPVDDDDKIVGGYTCRESSVPYQVSLNAGYHFCGGSLINDQWVVSAAHCYKYRIQ
VRLGEHNINVLEGNEQFVDSAKIIRHPNYNSWTLDNDIMLIKLASPVTLNARVASVPLPSSCAPAGTQCL
ISGWGNTLSNGVNNPDLLQCVDAPVLPQADCEASYPGDITNNMICVGFLEGGKDSCQGDSGGPVVCNGEL
QGIVSWGYGCAQPDAPGVYTKVCNYVDWIQNTIADN


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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