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Report for CCDS32765.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32765.2 Public Homo sapiens 17 FAAP100 24 110 108 CCDS HistoryNCBI Gene:80233Re-query CCDS DB by CCDS ID:32765.2Re-query CCDS DB by GeneID:80233See the combined annotation on chromosome 17 in Sequence Viewer

Public Note for CCDS 32765.1
The coding region has been updated to represent an alternative 5' splicing pattern, resulting in an extended N-terminus that is more supported by the available transcript and protein data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 32765.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327787.13 ENSP00000333283.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000327787.13Link to Ensembl Protein Viewer:ENSP00000333283.8Re-query CCDS DB by Nucleotide ID:ENST00000327787Re-query CCDS DB by Protein ID:ENSP00000333283
Original member Current member NCBI NM_025161.6 NP_079437.5 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025161.6Link to Protein Sequence:NP_079437.5Re-query CCDS DB by Nucleotide ID:NM_025161Re-query CCDS DB by Protein ID:NP_079437Link to BLAST:NP_079437.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079437.5 881 Q0VG06-1 881 100% 0 0

Chromosomal Locations for CCDS 32765.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 81540819 81540950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81541309 81541395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81544004 81544120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81545746 81545882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81546909 81547678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81549206 81549362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81550248 81551203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81551928 81552052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81552166 81552330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2646 nt):
ATGGCCGGCGCCGCGCCGCGGGTCCGCTACCTGGCGGGCTTCTGCTGCCCTCTCGGGGGCCTGGCGGCGG
GCAAGCCCCGCGTGCTGTGCCATGAGGCAGAGGTCTTCCTGTCCACCGGGAGCGAGCTCGTCTACGTGTA
CGACCAGGAGGGCGGGCTGCTGACCGCGGCGTTCCGGTTCCCCGACCAGGTGTGGCACCTGGAGCTGCTG
GCGCCGCGCAGGTTGCTGTACGCGCTGTGCGCCCGGAGGGGCCTCTACTGCCTGTCGCTGGACCACCCGG
GCAGGAGCAGGTCTACGAGCCAGGATGACAGGGACAGCGAGGACGGTGACCAGCCTTCCCCCGTGATCCC
TGTGGACCCCGATGCCTGCATCCTTCCCGATGCTGCGCTGTGCGCGTTCACCTTGCTGGACAGTGTGCTG
GTCACCCTGGTGCAGGGCCCTGCCCGATGGAAGATGCAGCTGTTTGAGCAGCCCTGTCCTGGGGAGGACC
CCCGGCCAGGAGGCCAGATCGGTGAGGTGGAGCTGTCCTCCTACACGCCCCCAGCCGGGGTCCCAGGAAA
GCCTGCAGCCCCCCACTTCCTTCCAGTGCTGTGCTCTGTGTCACCATCAGGCTCCAGGGTCCCGCACGAC
CTCCTCGGGGGCTCCGGGGGCTTCACGCTGGAGGACGCCCTCTTCGGGCTCCTCTTTGGAGCTGATGCCA
CCCTCCTGCAGTCACCTGTGGTCCTCTGTGGTCTCCCTGATGGCCAGCTCTGCTGTGTGATCCTGAAGGC
CCTGGTCACCTCCAGGTCAGCCCCTGGTGACCCAAATGCCCTTGTCAAGATCCTCCATCACCTGGAGGAG
CCCGTCATCTTCATAGGGGCCTTGAAGACAGAGCCACAGGCTGCAGAAGCTGCAGAGAATTTTCTGCCTG
ACGAGGATGTGCACTGTGACTGCCTGGTGGCCTTTGGTCACCACGGCCGGATGCTGGCCATCAAGGCCAG
CTGGGATGAGTCCGGGAAGCTGGTGCCCGAGCTGCGGGAGTACTGCCTCCCAGGCCCTGTGCTCTGCGCT
GCCTGTGGCGGGGGTGGCCGCGTGTACCACAGCACCCCTTCTGACCTCTGTGTGGTGGATCTGTCTCGGG
GAAGCACCCCGCTGGGCCCTGAGCAGCCCGAAGAAGGCCCGGGAGGCCTGCCCCCCATGCTGTGCCCAGC
CAGCCTGAACATCTGCAGTGTCGTCTCGCTGTCCGCGTCTCCCAGGACGCATGAAGGTGGCACCAAGCTC
CTGGCCCTGTCCGCCAAAGGCCGCCTGATGACCTGCAGCCTGGACCTGGACTCTGAGATGCCTGGCCCAG
CCAGGATGACCACAGAGAGTGCAGGTCAGAAAATAAAGGAGCTGCTGTCTGGAATTGGCAACATCTCTGA
GAGAGTGTCTTTTCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACTGACAAGCCTCAACGAGGCCATG
AACGTGAGCTGTGCACTGCTGTCAAGCGGCACGGGCCCCAGACCCATCTCCTGCACCACCAGCACCACCT
GGAGCCGCCTGCAGACACAGGATGTGCTCATGGCCACCTGCGTGCTAGAGAACAGCAGCAGCTTCAGCCT
GGACCAGGGGTGGACCCTGTGCATCCAGGTGCTCACCAGCTCCTGTGCTCTCGACCTGGACTCGGCCTGC
TCCGCCATCACCTACACCATCCCCGTGGACCAGCTCGGCCCCGGTGCTCGGCGGGAGGTGACGCTACCCC
TGGGCCCTGGTGAGAACGGCGGGCTCGACCTGCCCGTGACCGTGTCCTGCACGCTGTTCTACAGTCTCAG
GGAGGTGGTGGGCGGGGCCCTTGCCCCCTCAGACTCTGAGGACCCCTTTCTGGATGAGTGCCCCTCCGAC
GTCCTGCCCGAGCAAGAGGGTGTTTGCCTGCCCCTGAGCAGGCACACAGTGGACATGCTGCAGTGTCTGC
GCTTCCCTGGCCTGGCCCCGCCACACACACGGGCCCCCTCCCCACTCGGCCCCACCCGAGACCCTGTGGC
CACTTTTCTGGAAACTTGTCGGGAGCCTGGCAGCCAGCCAGCAGGACCCGCCTCCCTGCGGGCCGAGTAC
CTGCCCCCATCTGTGGCTTCCATCAAGGTGTCGGCGGAGCTGCTCAGAGCTGCCTTGAAGGACGGCCACT
CAGGCGTGCCCCTGTGCTGTGCCACCCTGCAGTGGCTCCTTGCTGAGAATGCTGCTGTGGACGTCGTGAG
GGCCCGAGCACTATCTTCCATCCAGGGAGTGGCCCCTGATGGCGCCAACGTTCACCTCATCGTCCGAGAG
GTGGCCATGACTGACCTGTGCCCAGCAGGGCCCATCCAGGCCGTGGAGATTCAAGTGGAAAGCTCCTCTC
TGGCCGACATTTGCAGGGCGCACCATGCCGTTGTCGGGCGCATGCAGACGATGGTGACAGAGCAGGCCAC
CCAGGGCTCCAGCGCTCCTGATCTCCGTGTGCAGTACCTCCGCCAGATCCACGCCAACCACGAGACACTG
CTGCGGGAGGTGCAGACCCTGCGCGACCGGCTCTGCACGGAGGATGAGGCCAGCTCCTGTGCCACCGCCC
AGAGGCTGCTACAGGTGTACCGGCAGCTGCGCCACCCCAGCCTCATCCTGCTGTGA

Translation (881 aa):
MAGAAPRVRYLAGFCCPLGGLAAGKPRVLCHEAEVFLSTGSELVYVYDQEGGLLTAAFRFPDQVWHLELL
APRRLLYALCARRGLYCLSLDHPGRSRSTSQDDRDSEDGDQPSPVIPVDPDACILPDAALCAFTLLDSVL
VTLVQGPARWKMQLFEQPCPGEDPRPGGQIGEVELSSYTPPAGVPGKPAAPHFLPVLCSVSPSGSRVPHD
LLGGSGGFTLEDALFGLLFGADATLLQSPVVLCGLPDGQLCCVILKALVTSRSAPGDPNALVKILHHLEE
PVIFIGALKTEPQAAEAAENFLPDEDVHCDCLVAFGHHGRMLAIKASWDESGKLVPELREYCLPGPVLCA
ACGGGGRVYHSTPSDLCVVDLSRGSTPLGPEQPEEGPGGLPPMLCPASLNICSVVSLSASPRTHEGGTKL
LALSAKGRLMTCSLDLDSEMPGPARMTTESAGQKIKELLSGIGNISERVSFLKKAVDQRNKALTSLNEAM
NVSCALLSSGTGPRPISCTTSTTWSRLQTQDVLMATCVLENSSSFSLDQGWTLCIQVLTSSCALDLDSAC
SAITYTIPVDQLGPGARREVTLPLGPGENGGLDLPVTVSCTLFYSLREVVGGALAPSDSEDPFLDECPSD
VLPEQEGVCLPLSRHTVDMLQCLRFPGLAPPHTRAPSPLGPTRDPVATFLETCREPGSQPAGPASLRAEY
LPPSVASIKVSAELLRAALKDGHSGVPLCCATLQWLLAENAAVDVVRARALSSIQGVAPDGANVHLIVRE
VAMTDLCPAGPIQAVEIQVESSSLADICRAHHAVVGRMQTMVTEQATQGSSAPDLRVQYLRQIHANHETL
LREVQTLRDRLCTEDEASSCATAQRLLQVYRQLRHPSLILL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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