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Report for CCDS34462.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34462.1 Public Homo sapiens 6 SLC35B2 24 110 108 CCDS HistoryNCBI Gene:347734Re-query CCDS DB by CCDS ID:34462.1Re-query CCDS DB by GeneID:347734See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34462.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393812.4 ENSP00000377401.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393812.4Link to Ensembl Protein Viewer:ENSP00000377401.3Re-query CCDS DB by Nucleotide ID:ENST00000393812Re-query CCDS DB by Protein ID:ENSP00000377401
Original member Current member NCBI NM_178148.4 NP_835361.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178148.4Link to Protein Sequence:NP_835361.1Re-query CCDS DB by Nucleotide ID:NM_178148Re-query CCDS DB by Protein ID:NP_835361Link to BLAST:NP_835361.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_835361.1 432 Q8TB61-1 432 100% 0 0

Chromosomal Locations for CCDS 34462.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 44254706 44255644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 44256342 44256496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 44256685 44256878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 44257400 44257410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1299 nt):
ATGGACGCCAGATGGTGGGCAGTGGTGGTGCTGGCTGCGTTCCCCTCCCTAGGGGCAGGTGGGGAGACTC
CCGAAGCCCCTCCGGAGTCATGGACCCAGCTATGGTTCTTCCGATTTGTGGTGAATGCTGCTGGCTATGC
CAGCTTTATGGTACCTGGCTACCTCCTGGTGCAGTACTTCAGGCGGAAGAACTACCTGGAGACCGGTAGG
GGCCTCTGCTTTCCCCTGGTGAAAGCTTGTGTGTTTGGCAATGAGCCCAAGGCCTCTGATGAGGTTCCCC
TGGCGCCCCGAACAGAGGCGGCAGAGACCACCCCGATGTGGCAGGCCCTGAAGCTGCTCTTCTGTGCCAC
AGGGCTCCAGGTGTCTTATCTGACTTGGGGTGTGCTGCAGGAAAGAGTGATGACCCGCAGCTATGGGGCC
ACAGCCACATCACCGGGTGAGCGCTTTACGGACTCGCAGTTCCTGGTGCTAATGAACCGAGTGCTGGCAC
TGATTGTGGCTGGCCTCTCCTGTGTTCTCTGCAAGCAGCCCCGGCATGGGGCACCCATGTACCGGTACTC
CTTTGCCAGCCTGTCCAATGTGCTTAGCAGCTGGTGCCAATACGAAGCTCTTAAGTTCGTCAGCTTCCCC
ACCCAGGTGCTGGCCAAGGCCTCTAAGGTGATCCCTGTCATGCTGATGGGAAAGCTTGTGTCTCGGCGCA
GCTACGAACACTGGGAGTACCTGACAGCCACCCTCATCTCCATTGGGGTCAGCATGTTTCTGCTATCCAG
CGGACCAGAGCCCCGCAGCTCCCCAGCCACCACACTCTCAGGCCTCATCTTACTGGCAGGTTATATTGCT
TTTGACAGCTTCACCTCAAACTGGCAGGATGCCCTGTTTGCCTATAAGATGTCATCGGTGCAGATGATGT
TTGGGGTCAATTTCTTCTCCTGCCTCTTCACAGTGGGCTCACTGCTAGAACAGGGGGCCCTACTGGAGGG
AACCCGCTTCATGGGGCGACACAGTGAGTTTGCTGCCCATGCCCTGCTACTCTCCATCTGCTCCGCATGT
GGCCAGCTCTTCATCTTTTACACCATTGGGCAGTTTGGGGCTGCCGTCTTCACCATCATCATGACCCTCC
GCCAGGCCTTTGCCATCCTTCTTTCCTGCCTTCTCTATGGCCACACTGTCACTGTGGTGGGAGGGCTGGG
GGTGGCTGTGGTCTTTGCTGCCCTCCTGCTCAGAGTCTACGCGCGGGGCCGTCTAAAGCAACGGGGAAAG
AAGGCTGTGCCTGTTGAGTCTCCTGTGCAGAAGGTTTGA

Translation (432 aa):
MDARWWAVVVLAAFPSLGAGGETPEAPPESWTQLWFFRFVVNAAGYASFMVPGYLLVQYFRRKNYLETGR
GLCFPLVKACVFGNEPKASDEVPLAPRTEAAETTPMWQALKLLFCATGLQVSYLTWGVLQERVMTRSYGA
TATSPGERFTDSQFLVLMNRVLALIVAGLSCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFP
TQVLAKASKVIPVMLMGKLVSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIA
FDSFTSNWQDALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSAC
GQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGK
KAVPVESPVQKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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