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Report for CCDS50458.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50458.1 Public Mus musculus 19 As3mt 23 108 98 CCDS HistoryNCBI Gene:57344Re-query CCDS DB by CCDS ID:50458.1Re-query CCDS DB by GeneID:57344See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50458.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000003655.8 ENSMUSP00000003655.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000003655.8Link to Ensembl Protein Viewer:ENSMUSP00000003655.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000003655Re-query CCDS DB by Protein ID:ENSMUSP00000003655
Original member Current member NCBI NM_020577.3 NP_065602.2 Accepted alive Link to Nucleotide Sequence:NM_020577.3Link to Protein Sequence:NP_065602.2Re-query CCDS DB by Nucleotide ID:NM_020577Re-query CCDS DB by Protein ID:NP_065602Link to BLAST:NP_065602.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065602.2 376 Q91WU5 376 100% 0 0

Chromosomal Locations for CCDS 50458.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 46707536 46707536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46707756 46707799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46708070 46708197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46708968 46709118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46709547 46709683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46712221 46712290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46715189 46715270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46719889 46720020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46720314 46720456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46724904 46725038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46740461 46740568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1131 nt):
ATGGCTGCTTCCCGAGACGCTGATGAGATCCACAAGGACGTTCAGAACTACTATGGGAATGTACTGAAGA
CATCTGCAGACCTCCAGACTAATGCTTGTGTCACGCGAGCCAAGCCGGTCCCCAGCTACATCCGGGAAAG
TCTGCAGAATGTACACGAAGACGTTAGTTCGAGGTATTATGGCTGTGGTCTGACTGTTCCTGAGCGGCTG
GAAAACTGCCGAATTTTGGATCTGGGTAGTGGGAGTGGCAGGGATTGCTATGTGCTTAGCCAGCTGGTTG
GTGAGAAGGGACATGTCACCGGAATAGACATGACTGAGGTCCAGGTCGAAGTGGCTAAAACCTATCTTGA
ACACCACATGGAAAAATTTGGTTTCCAGGCACCCAATGTGACTTTTCTCCACGGCCGCATCGAGAAGTTG
GCAGAGGCTGGGATCCAGAGTGAGAGCTATGATATTGTCATATCCAACTGTGTTATCAACCTTGTTCCTG
ATAAACAACAAGTCCTCCAGGAGGTCTATCGAGTGCTGAAGCACGGCGGGGAGCTCTATTTCAGTGACGT
CTATGCCAGCCTTGAAGTGCCAGAAGACATCAAGTCGCACAAAGTTTTATGGGGGGAATGCCTGGGAGGC
GCTCTGTACTGGAAGGATCTTGCCATCATTGCCCAAAAGATTGGGTTCTGCCCTCCACGTTTGGTCACTG
CCGATATCATTACTGTTGAAAACAAGGAGCTCGAAGGGGTTCTTGGTGACTGTCGCTTTGTGTCTGCCAC
ATTTCGCCTCTTCAAACTCCCTAAGACAGAGCCAGCCGAAAGATGCCGAGTTGTTTACAATGGAGGAATC
AAGGGACATGAAAAGGAACTAATTTTCGATGCAAATTTCACATTCAAGGAAGGCGAAGCTGTTGCAGTGG
ATGAGGAGACGGCAGCTGTCCTGAAGAACTCACGTTTTGCTCCGGATTTTCTCTTCACACCTGTTGACGC
CTCGCTGCCAGCTCCCCAGGGCCGTTCTGAGTTAGAGACAAAGGTTCTAATCAGAGATCCATTCAAGCTT
GCAGAGGACTCTGACAAGATGAAGCCCAGACATGCACCTGAAGGCACGGGAGGCTGCTGTGGCAAGAGGA
AAAACTGCTAG

Translation (376 aa):
MAASRDADEIHKDVQNYYGNVLKTSADLQTNACVTRAKPVPSYIRESLQNVHEDVSSRYYGCGLTVPERL
ENCRILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTEVQVEVAKTYLEHHMEKFGFQAPNVTFLHGRIEKL
AEAGIQSESYDIVISNCVINLVPDKQQVLQEVYRVLKHGGELYFSDVYASLEVPEDIKSHKVLWGECLGG
ALYWKDLAIIAQKIGFCPPRLVTADIITVENKELEGVLGDCRFVSATFRLFKLPKTEPAERCRVVYNGGI
KGHEKELIFDANFTFKEGEAVAVDEETAAVLKNSRFAPDFLFTPVDASLPAPQGRSELETKVLIRDPFKL
AEDSDKMKPRHAPEGTGGCCGKRKNC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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