NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS57778.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57778.1 Public Mus musculus X Tmem164 23 108 98 CCDS HistoryNCBI Gene:209497Re-query CCDS DB by CCDS ID:57778.1Re-query CCDS DB by GeneID:209497See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57778.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000101198.8 ENSMUSP00000098759.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000101198.8Link to Ensembl Protein Viewer:ENSMUSP00000098759.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000101198Re-query CCDS DB by Protein ID:ENSMUSP00000098759
Original member Current member EBI ENSMUST00000112889.7 ENSMUSP00000108510.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112889.7Link to Ensembl Protein Viewer:ENSMUSP00000108510.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112889Re-query CCDS DB by Protein ID:ENSMUSP00000108510
Original member Current member NCBI NM_001199357.1 NP_001186286.1 Accepted alive Link to Nucleotide Sequence:NM_001199357.1Link to Protein Sequence:NP_001186286.1Re-query CCDS DB by Nucleotide ID:NM_001199357Re-query CCDS DB by Protein ID:NP_001186286Link to BLAST:NP_001186286.1
Original member Current member NCBI NM_001358725.1 NP_001345654.1 Accepted alive Link to Nucleotide Sequence:NM_001358725.1Link to Protein Sequence:NP_001345654.1Re-query CCDS DB by Nucleotide ID:NM_001358725Re-query CCDS DB by Protein ID:NP_001345654Link to BLAST:NP_001345654.1
Original member Current member NCBI NM_001358727.1 NP_001345656.1 Accepted alive Link to Nucleotide Sequence:NM_001358727.1Link to Protein Sequence:NP_001345656.1Re-query CCDS DB by Nucleotide ID:NM_001358727Re-query CCDS DB by Protein ID:NP_001345656Link to BLAST:NP_001345656.1
Original member Current member NCBI NM_001358728.1 NP_001345657.1 Accepted alive Link to Nucleotide Sequence:NM_001358728.1Link to Protein Sequence:NP_001345657.1Re-query CCDS DB by Nucleotide ID:NM_001358728Re-query CCDS DB by Protein ID:NP_001345657Link to BLAST:NP_001345657.1

Chromosomal Locations for CCDS 57778.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 142770974 142771033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 142805990 142806068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 142832501 142832601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 142834185 142834391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (447 nt):
ATGCACATGTTGAATGGAGCTCTTCTGGCATTGCTGTTCCCCGTGGTAAATACCCGGCTGCTCCCCTTTG
AACTAGAGATTTACTACATCCAGCATGCTATGCTCTACGTGGTCCCTGTCTACCTGCTTTGGAAAGGAGG
TGCTTACACCCCAGAGCCCCTCTGCAATTTCCAGTGGGCTCTTCTCTCGACTGGCCTCATGTTCTTTTAC
CACTTCAGCTTCCTGCAGATCCTCGGCCTGGTCACCGAAGTGAATTTGAACAACATGCTGTGTCCGGCCA
TCTCAGACCCATTCTACGGCCCCTGGTATCGCATCTGGGCCTCGGGACACCAGACTCTCATGACCATGAC
CCACGGGAAGCTGGTCATCCTGTTCTCATACATGGCTGGGCCCTTGTGTAAATATCTGCTGGATTTGCTC
CGGCTTCCAGCCAAGAAAATAGACTAA

Translation (148 aa):
MHMLNGALLALLFPVVNTRLLPFELEIYYIQHAMLYVVPVYLLWKGGAYTPEPLCNFQWALLSTGLMFFY
HFSFLQILGLVTEVNLNNMLCPAISDPFYGPWYRIWASGHQTLMTMTHGKLVILFSYMAGPLCKYLLDLL
RLPAKKID


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH