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Report for CCDS8124.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8124.1 Public Homo sapiens 11 EIF1AD 24 110 108 CCDS HistoryNCBI Gene:84285Re-query CCDS DB by CCDS ID:8124.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8124.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312234.6 ENSP00000309175.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312234.6Link to Ensembl Protein Viewer:ENSP00000309175.2Re-query CCDS DB by Nucleotide ID:ENST00000312234Re-query CCDS DB by Protein ID:ENSP00000309175
Original member Current member EBI ENST00000533544.6 ENSP00000434056.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000533544.6Link to Ensembl Protein Viewer:ENSP00000434056.1Re-query CCDS DB by Nucleotide ID:ENST00000533544Re-query CCDS DB by Protein ID:ENSP00000434056
Original member Current member EBI ENST00000527249.5 ENSP00000435439.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527249.5Link to Ensembl Protein Viewer:ENSP00000435439.1Re-query CCDS DB by Nucleotide ID:ENST00000527249Re-query CCDS DB by Protein ID:ENSP00000435439
Original member Current member EBI ENST00000529964.5 ENSP00000435942.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000529964.5Link to Ensembl Protein Viewer:ENSP00000435942.2Re-query CCDS DB by Nucleotide ID:ENST00000529964Re-query CCDS DB by Protein ID:ENSP00000435942
Original member Current member EBI ENST00000526451.5 ENSP00000436644.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000526451.5Link to Ensembl Protein Viewer:ENSP00000436644.1Re-query CCDS DB by Nucleotide ID:ENST00000526451Re-query CCDS DB by Protein ID:ENSP00000436644
Original member Current member NCBI NM_001242481.2 NP_001229410.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001242481.2Link to Protein Sequence:NP_001229410.1Re-query CCDS DB by Nucleotide ID:NM_001242481Re-query CCDS DB by Protein ID:NP_001229410Link to BLAST:NP_001229410.1
Original member Current member NCBI NM_001242482.2 NP_001229411.1 Accepted alive Link to Nucleotide Sequence:NM_001242482.2Link to Protein Sequence:NP_001229411.1Re-query CCDS DB by Nucleotide ID:NM_001242482Re-query CCDS DB by Protein ID:NP_001229411Link to BLAST:NP_001229411.1
Original member Current member NCBI NM_001242483.2 NP_001229412.1 Accepted alive Link to Nucleotide Sequence:NM_001242483.2Link to Protein Sequence:NP_001229412.1Re-query CCDS DB by Nucleotide ID:NM_001242483Re-query CCDS DB by Protein ID:NP_001229412Link to BLAST:NP_001229412.1
Original member Current member NCBI NM_001242484.2 NP_001229413.1 Accepted alive Link to Nucleotide Sequence:NM_001242484.2Link to Protein Sequence:NP_001229413.1Re-query CCDS DB by Nucleotide ID:NM_001242484Re-query CCDS DB by Protein ID:NP_001229413Link to BLAST:NP_001229413.1
Original member Current member NCBI NM_001242485.2 NP_001229414.1 Accepted alive Link to Nucleotide Sequence:NM_001242485.2Link to Protein Sequence:NP_001229414.1Re-query CCDS DB by Nucleotide ID:NM_001242485Re-query CCDS DB by Protein ID:NP_001229414Link to BLAST:NP_001229414.1
Original member Current member NCBI NM_001242486.2 NP_001229415.1 Accepted alive Link to Nucleotide Sequence:NM_001242486.2Link to Protein Sequence:NP_001229415.1Re-query CCDS DB by Nucleotide ID:NM_001242486Re-query CCDS DB by Protein ID:NP_001229415Link to BLAST:NP_001229415.1
Original member Current member NCBI NM_032325.4 NP_115701.2 Accepted alive Link to Nucleotide Sequence:NM_032325.4Link to Protein Sequence:NP_115701.2Re-query CCDS DB by Nucleotide ID:NM_032325Re-query CCDS DB by Protein ID:NP_115701Link to BLAST:NP_115701.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229410.1 165 Q8N9N8 165 100% 0 0
NP_001229411.1 165 Q8N9N8 165 100% 0 0
NP_001229412.1 165 Q8N9N8 165 100% 0 0
NP_001229413.1 165 Q8N9N8 165 100% 0 0
NP_001229414.1 165 Q8N9N8 165 100% 0 0
NP_001229415.1 165 Q8N9N8 165 100% 0 0
NP_115701.2 165 Q8N9N8 165 100% 0 0

Chromosomal Locations for CCDS 8124.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 65998599 65998743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65999350 65999397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 65999567 65999675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66000053 66000161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66000303 66000389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (498 nt):
ATGTCTCAGGCCACCAAGAGGAAGCATGTGGTGAAGGAGGTGCTAGGGGAGCACATAGTGCCCTCCGACC
AGCAGCAGATTGTCAGGGTACTCAGGACCCCAGGGAACAATCTGCATGAGGTGGAGACAGCCCAAGGGCA
GCGCTTCCTGGTGAGCATGCCCTCCAAATACCGCAAGAACATCTGGATCAAGAGAGGGGACTTTCTCATT
GTTGACCCCATTGAAGAGGGAGAAAAGGTGAAGGCTGAAATCTCGTTTGTGCTCTGCAAGGACCACGTGC
GCTCTCTGCAGAAGGAGGGGTTTTGGCCTGAGGCCTTCTCTGAAGTGGCTGAGAAACACAACAACAGGAA
CAGACAAACTCAACCAGAACTCCCAGCTGAGCCACAGTTATCAGGAGAGGAGTCCAGCTCAGAAGATGAT
TCTGACCTGTTTGTTAACACAAACCGCAGACAGTATCATGAGAGTGAGGAGGAGAGTGAAGAGGAGGAGG
CAGCCTGA

Translation (165 aa):
MSQATKRKHVVKEVLGEHIVPSDQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLI
VDPIEEGEKVKAEISFVLCKDHVRSLQKEGFWPEAFSEVAEKHNNRNRQTQPELPAEPQLSGEESSSEDD
SDLFVNTNRRQYHESEEESEEEEAA


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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