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Report for CCDS3244.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3244.1 Public Homo sapiens 3 B3GNT5 24 110 108 CCDS HistoryNCBI Gene:84002Re-query CCDS DB by CCDS ID:3244.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3244.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326505.4 ENSP00000316173.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000326505.4Link to Ensembl Protein Viewer:ENSP00000316173.3Re-query CCDS DB by Nucleotide ID:ENST00000326505Re-query CCDS DB by Protein ID:ENSP00000316173
Original member Current member EBI ENST00000465010.1 ENSP00000417868.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000465010.1Link to Ensembl Protein Viewer:ENSP00000417868.1Re-query CCDS DB by Nucleotide ID:ENST00000465010Re-query CCDS DB by Protein ID:ENSP00000417868
Original member Current member EBI ENST00000460419.1 ENSP00000420778.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000460419.1Link to Ensembl Protein Viewer:ENSP00000420778.1Re-query CCDS DB by Nucleotide ID:ENST00000460419Re-query CCDS DB by Protein ID:ENSP00000420778
Original member Current member NCBI NM_032047.5 NP_114436.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032047.5Link to Protein Sequence:NP_114436.1Re-query CCDS DB by Nucleotide ID:NM_032047Re-query CCDS DB by Protein ID:NP_114436Link to BLAST:NP_114436.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114436.1 378 Q9BYG0 378 100% 0 0

Chromosomal Locations for CCDS 3244.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 183269799 183270935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1137 nt):
ATGAGAATGTTGGTTAGTGGCAGAAGAGTCAAAAAATGGCAGTTAATTATTCAGTTATTTGCTACTTGTT
TTTTAGCGAGCCTCATGTTTTTTTGGGAACCAATCGATAATCACATTGTGAGCCATATGAAGTCATATTC
TTACAGATACCTCATAAATAGCTATGACTTTGTGAATGATACCCTGTCTCTTAAGCACACCTCAGCGGGG
CCTCGCTACCAATACTTGATTAACCACAAGGAAAAGTGTCAAGCTCAAGACGTCCTCCTTTTACTGTTTG
TAAAAACTGCTCCTGAAAACTATGATCGACGTTCCGGAATTAGAAGGACGTGGGGCAATGAAAATTATGT
TCGGTCTCAGCTGAATGCCAACATCAAAACTCTGTTTGCCTTAGGAACTCCTAATCCACTGGAGGGAGAA
GAACTACAAAGAAAACTGGCTTGGGAAGATCAAAGGTACAATGATATAATTCAGCAAGACTTTGTTGATT
CTTTCTACAATCTTACTCTGAAATTACTTATGCAGTTCAGTTGGGCAAATACCTATTGTCCACATGCCAA
ATTTCTTATGACTGCTGATGATGACATATTTATTCACATGCCAAATCTGATTGAGTACCTTCAAAGTTTA
GAACAAATTGGTGTTCAAGACTTTTGGATTGGTCGTGTTCATCGTGGTGCCCCTCCCATTAGAGATAAAA
GCAGCAAATACTACGTGTCCTATGAAATGTACCAGTGGCCAGCTTACCCTGACTACACAGCCGGAGCTGC
CTATGTAATCTCCGGTGATGTAGCTGCCAAAGTCTATGAGGCATCACAGACACTAAATTCAAGTCTTTAC
ATAGACGATGTGTTCATGGGCCTCTGTGCCAATAAAATAGGGATAGTACCGCAGGACCATGTGTTTTTTT
CTGGAGAGGGTAAAACTCCTTATCATCCCTGCATCTATGAAAAAATGATGACATCTCATGGACACTTAGA
AGATCTCCAGGACCTTTGGAAGAATGCTACAGATCCTAAAGTAAAAACCATTTCCAAAGGTTTTTTTGGT
CAAATATACTGCAGATTAATGAAGATAATTCTCCTTTGTAAAATTAGCTATGTGGACACATACCCTTGTA
GGGCTGCGTTTATCTAA

Translation (378 aa):
MRMLVSGRRVKKWQLIIQLFATCFLASLMFFWEPIDNHIVSHMKSYSYRYLINSYDFVNDTLSLKHTSAG
PRYQYLINHKEKCQAQDVLLLLFVKTAPENYDRRSGIRRTWGNENYVRSQLNANIKTLFALGTPNPLEGE
ELQRKLAWEDQRYNDIIQQDFVDSFYNLTLKLLMQFSWANTYCPHAKFLMTADDDIFIHMPNLIEYLQSL
EQIGVQDFWIGRVHRGAPPIRDKSSKYYVSYEMYQWPAYPDYTAGAAYVISGDVAAKVYEASQTLNSSLY
IDDVFMGLCANKIGIVPQDHVFFSGEGKTPYHPCIYEKMMTSHGHLEDLQDLWKNATDPKVKTISKGFFG
QIYCRLMKIILLCKISYVDTYPCRAAFI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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