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Report for CCDS48291.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48291.1 Public Mus musculus 1 Glb1l 23 108 98 CCDS HistoryNCBI Gene:74577Re-query CCDS DB by CCDS ID:48291.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48291.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113623.7 ENSMUSP00000109253.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113623.7Link to Ensembl Protein Viewer:ENSMUSP00000109253.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113623Re-query CCDS DB by Protein ID:ENSMUSP00000109253
Original member Current member EBI ENSMUST00000155716.7 ENSMUSP00000136285.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000155716.7Link to Ensembl Protein Viewer:ENSMUSP00000136285.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000155716Re-query CCDS DB by Protein ID:ENSMUSP00000136285
Original member NCBI NM_029010.1 NP_083286.1 Updated not alive Link to Nucleotide Sequence:NM_029010.1Link to Protein Sequence:NP_083286.1Re-query CCDS DB by Nucleotide ID:NM_029010Re-query CCDS DB by Protein ID:NP_083286
Current member NCBI NM_029010.2 NP_083286.1 Accepted alive Link to Nucleotide Sequence:NM_029010.2Link to Protein Sequence:NP_083286.1Re-query CCDS DB by Nucleotide ID:NM_029010Re-query CCDS DB by Protein ID:NP_083286Link to BLAST:NP_083286.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083286.1 646 Q8VC60-1 646 100% 0 0

Chromosomal Locations for CCDS 48291.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 75199494 75199757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75199911 75200126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75200330 75200461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75200944 75201057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75201198 75201287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75201399 75201473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75201743 75201861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75202050 75202090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75202187 75202308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75202408 75202466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75202575 75202749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75202847 75202941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75208319 75208379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75208687 75208837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75209056 75209222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 75209381 75209440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1941 nt):
ATGCCACCCGACCTGCCTTCCCTGCTGCTGCGGCTTGTGGTCCTACTGCTGCTGTCCCAGGCAGAAGCTC
GCTCCTTCGTTGTGGATCGGGAACATGACAGATTCCTCCTGGATGGGGTCCCCTTCCGCTATGTTTCTGG
CAGCCTGCACTACTTTCGAGTACCGCCGGTTCTGTGGGCCGACCGGCTTCTCAAGATGCAGTTGAGCGGC
CTCAACGCTGTGCAGTTTTATGTGCCTTGGAACTACCATGAGCCAGAGCCTGGGATCTATAACTTTAATG
GCAGCCGGGACCTCATTGCCTTCCTGAATGAGGCAGCTAAAGTGAACCTGTTGGTTATTCTGAGACCAGG
ACCTTACATCTGTGCTGAGTGGGAGATGGGAGGTCTCCCCTCTTGGTTGCTTCGAAACCCTAATATTCAT
CTGAGAACCTCAGATCCTGCCTTCCTTGAAGCTGTGGACTCCTGGTTCAAGGTCTTGCTGCCAAAGATAT
ATCCATTTCTCTACCACAATGGGGGCAACATCATTAGCATTCAGGTGGAGAACGAATACGGTAGCTACAA
GGCCTGTGACTTCAAGTATATGAGACACTTAGCTGGCCTCTTCCGAGCATTACTAGGGGACAAGATCTTG
CTCTTCACCACAGATGGGCCTCACGGACTCAGATGTGGCTCCCTTCAGGGACTCTATACCACTATAGATT
TTGGCCCAGCTGACAATGTGACCAGAATCTTTTCCCTGCTTCGGGAGTATGAACCTCATGGGCCATTGGT
GAACTCGGAGTACTATACAGGCTGGCTGGATTACTGGGGCCAAAATCATTCCACACGATCCAGTCCAGCT
GTAGCCCAAGGACTAGAAAAAATGCTCAAGTTGGGAGCCAGTGTGAACATGTATATGTTCCATGGAGGTA
CCAACTTTGGATACTGGAATGGAGCTGACGAGAAGGGACGCTTCCTTCCAATTACTACCAGCTACGACTA
TGATGCACCCATATCTGAAGCAGGGGACCCTACACCTAAGCTTTTTGCAATTCGAAATGTCATCAGCAAG
TTCCAGGAAATTCCCTTGGGACCTTTACCTCCTCCCAGCCCCAAGATGAAGTTTGGACCTTTGACTATGA
GCCTGGATGGGAATTTGCTGTCTTTCCTAGACTTTCTCTGCCCCCAAGGCCCAATCCATTCAGTTTTGCC
ATTGACCTTTGAGGCTGTTAAACTGGACCATGGCTTTATGTTGTACAGGACCTATCTGACTTCTCCTGTT
TTAGAACCAACACCATTCTGGGTGCCAAATAATGGGATTCATGACCGAGCCTATGTGATGGTAGACGGGG
TATTGAAGGGCGTTCTGGAGCGGAGTTTGAAACAAGAACTGTATTTGACTGGGACAGTAGGGACCAGGCT
GGATATATTGCTAGAGAATATGGGGAGGCTCAGTTTTGGGTCTAACCACAGTGACTTCAAGGGCCTGTTA
GAAGCACCACTGCTGGGGCAGACCATCCTCACTGAGTGGATGATGTTCCCTCTCAAGGTGGATAAGCTTG
TAAAGTGGTGGTTCCCCCTGCAGCTGATGAAAAGAGCCCTGCCTCAAGCTTCCTCTGTCCCTGCCTTCTA
TTCCGCAAAGTTTCCAGTTTTCGGCTTGCTTGGGGACACATTTCTCTATCTACCTGGATGGACCAAGGGC
CAAGTGTGGATCAATGGGTTTAACTTGGGCCGGTACTGGACAATGCGGGGTCCACAACAAACCCTATACG
TGCCAAGACTGCTGCTGTTTGGTAGATCAATCAACAAAATCACATTGCTGGAGCTAGAAAATGTGCCTCA
TAACCCCCAAGTCCAGTTTTTGGATAAGCCTATCCTCAATAGCACTTTGCATTGGGGGTATAACTTTCTT
CTCTCAGAAACACAAGGTTCCTTTGAACCAATGGAGTTAAGTGGGCACTGA

Translation (646 aa):
MPPDLPSLLLRLVVLLLLSQAEARSFVVDREHDRFLLDGVPFRYVSGSLHYFRVPPVLWADRLLKMQLSG
LNAVQFYVPWNYHEPEPGIYNFNGSRDLIAFLNEAAKVNLLVILRPGPYICAEWEMGGLPSWLLRNPNIH
LRTSDPAFLEAVDSWFKVLLPKIYPFLYHNGGNIISIQVENEYGSYKACDFKYMRHLAGLFRALLGDKIL
LFTTDGPHGLRCGSLQGLYTTIDFGPADNVTRIFSLLREYEPHGPLVNSEYYTGWLDYWGQNHSTRSSPA
VAQGLEKMLKLGASVNMYMFHGGTNFGYWNGADEKGRFLPITTSYDYDAPISEAGDPTPKLFAIRNVISK
FQEIPLGPLPPPSPKMKFGPLTMSLDGNLLSFLDFLCPQGPIHSVLPLTFEAVKLDHGFMLYRTYLTSPV
LEPTPFWVPNNGIHDRAYVMVDGVLKGVLERSLKQELYLTGTVGTRLDILLENMGRLSFGSNHSDFKGLL
EAPLLGQTILTEWMMFPLKVDKLVKWWFPLQLMKRALPQASSVPAFYSAKFPVFGLLGDTFLYLPGWTKG
QVWINGFNLGRYWTMRGPQQTLYVPRLLLFGRSINKITLLELENVPHNPQVQFLDKPILNSTLHWGYNFL
LSETQGSFEPMELSGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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