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Report for CCDS23757.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23757.1 Public Mus musculus 10 Arhgap18 23 108 98 CCDS HistoryNCBI Gene:73910Re-query CCDS DB by CCDS ID:23757.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23757.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000039557.8 ENSMUSP00000044834.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000039557.8Link to Ensembl Protein Viewer:ENSMUSP00000044834.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000039557Re-query CCDS DB by Protein ID:ENSMUSP00000044834
Original member Current member NCBI NM_176837.2 NP_789807.1 Accepted alive Link to Nucleotide Sequence:NM_176837.2Link to Protein Sequence:NP_789807.1Re-query CCDS DB by Nucleotide ID:NM_176837Re-query CCDS DB by Protein ID:NP_789807Link to BLAST:NP_789807.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_789807.1 663 Q8K0Q5 663 100% 0 0

Chromosomal Locations for CCDS 23757.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 26772584 26772696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26845932 26846128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26849875 26850110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26854874 26854937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26860557 26860732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26869921 26870086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26872673 26872764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26877157 26877234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26878891 26879050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26880688 26880770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26887781 26887987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26889732 26889872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26912607 26912731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26916393 26916454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 26917005 26917096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1992 nt):
ATGAACTGGCTATCGAGTTCCTCGGGAGTTGTGCTAACTGCTTACCACCCCAGCGGCAAGGACCAGGTCG
CTGGGGACAGCCATGTAAAGGGAGGCGACGAAGCCACCTCCAGTCGCAGATATGGCCAATACACCATAAA
CCAAGAAGGCTCCACCAAAGTTCCCGAGAGGCCTCCATTTGATCGATCGAGTTCTCAGGATTCCTTGGAT
GAATCAATGGAAGCCTATTGGACAGAACTAGAAAACATCAAGAGGTCGAATGAAAATCGCCAAGAAGGTC
AAGAGGCCATAGTTGTCAAAGAACCTGATGAGGGAGAACTGGAAGAAGAATGGCTCAAAGAAGCAGGTCT
ATCCAATCTTTTTGGAGAGTCTATTGATGACCCGCAGGAAAGCATTCTGTTTTTATCTACACTGACCCGG
ACTCAGGCAGCAGCTGTTCAGAAACGGGTGGAAACGGTCTCCCAGACCTTGAGGAAGAAAAACAAACAGC
ACCACATTCGTGACGTCAGAGACATATTTGCTCAACAGAGAGAGGCACAAGAAAAACCTCCAGATGACTC
AGACTTGCGGTCAGTCAGAACAAACGAAAACAAAGGCCAAGGAAAAGATGATCAGCCATCTAGTGGGGCT
GTCGATAGCAAGGAGCAGATCTCACGGGTGCCTGAGGACACACCTGCCTCTGAAACAGACATCAATCTGG
AGGTGTCATTTGCGGAGCAAGCTGTCAATCAGAAAGAGTTCAGTAAGGAGAGGACGCAGAAGATCAGCAG
CAACGACTCTTTGCCCAGTTTCAGACTGCCAAAAGATAAAACAGGTACGACAAGGATTGGAGACTTGGCA
CCCCAAGACATGAAGAAAGTTTGCTCTCTATCCCTGATTGAACTCACTGCCCTGTATGATGTGTTGGGCT
TGGAATTCAAACAACAGAAAGCTGTGAAAATCAAAACCAGAGACTCTGGTCTTTTTGGTATTCCTTTAAC
GATATTGTTAGAACAAGATCAAAGAAAAGTGCCTGGAACACGAATACCCTTGATCTTTCAAAAACTGATT
TCTCGAATTGAAGAAGGCAGTCTGGAAACCGAGGGCCTCCTACGGATACCAGGAGCAGCCATGAGAATCA
AGAATCTTTGCCAAGAACTAGAAGCGAAATTTTACGAGGGGACTTTCAATTGGGAAAGTGTCAAACAGCA
CGATGCGGCCAGCCTGCTGAAGCTCTTTCTGAGAGAATTGCCCCAGCCACTGCTGAGCATGGAGTATCTC
AAAGCCTTCCAAGCTGTCCAGAATCTTCCAACCAGAAAGGAACAGTTGCAGGCTTTGAACCTCCTTGTCA
TTCTTCTACCTGACGCAAACAGAGACACACTGAAGGCCTTGCTTGAATTTCTCCAAAGAGTCATAGATAA
CAAAGAGAAGAACAAGATGACAGCTGGGAATGTAGCAATGGTCATGGCCCCAAATCTCTTCATGTGCCAC
ACGCTGGGCTTGAAGTCCAGTGAACAGCGAGAATTTGAAATGGCAGCTGGGACAGCAAATGTCATGCACT
TATTGATTAGGTACCAGAAAATTCTATGGACAATCCCTAAATTTATTGTAATCCAAGTGAGGAAACAGAA
TATTGAGAATCAAAAGAAGGAAAGGAAAGCCATGAAGAAATTGCTGAAGAAAATGGCTTATGACCGGGAA
AAACATGAAAAGCAAGATAAAACTGCAAATGGTGCTGATGTTCCTCAGGGAGTGATTCGAGTGCAAGCTC
CCCATCTTTCAAAAGTTTCCATGGCAATACAGCTAACTGAAGAACTAAAAGCCAGCGATGTGCTTGCCAG
GTTTCTCAGCCAAGAAAGTGGGGTTGCCCAGACACTCAAGAAAGGAGAAGTTTTCCTGTATGAGATTGGA
GGAAATATTGGGGAACGTTGCCTCGATGACGACACACACATGAAGGACTTGTACCAACTGAACCCGAATG
CCGAGTGGGTCATAAAATCCAAGCCAGTGTAG

Translation (663 aa):
MNWLSSSSGVVLTAYHPSGKDQVAGDSHVKGGDEATSSRRYGQYTINQEGSTKVPERPPFDRSSSQDSLD
ESMEAYWTELENIKRSNENRQEGQEAIVVKEPDEGELEEEWLKEAGLSNLFGESIDDPQESILFLSTLTR
TQAAAVQKRVETVSQTLRKKNKQHHIRDVRDIFAQQREAQEKPPDDSDLRSVRTNENKGQGKDDQPSSGA
VDSKEQISRVPEDTPASETDINLEVSFAEQAVNQKEFSKERTQKISSNDSLPSFRLPKDKTGTTRIGDLA
PQDMKKVCSLSLIELTALYDVLGLEFKQQKAVKIKTRDSGLFGIPLTILLEQDQRKVPGTRIPLIFQKLI
SRIEEGSLETEGLLRIPGAAMRIKNLCQELEAKFYEGTFNWESVKQHDAASLLKLFLRELPQPLLSMEYL
KAFQAVQNLPTRKEQLQALNLLVILLPDANRDTLKALLEFLQRVIDNKEKNKMTAGNVAMVMAPNLFMCH
TLGLKSSEQREFEMAAGTANVMHLLIRYQKILWTIPKFIVIQVRKQNIENQKKERKAMKKLLKKMAYDRE
KHEKQDKTANGADVPQGVIRVQAPHLSKVSMAIQLTEELKASDVLARFLSQESGVAQTLKKGEVFLYEIG
GNIGERCLDDDTHMKDLYQLNPNAEWVIKSKPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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