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Report for CCDS50989.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50989.1 Public Mus musculus 3 Anxa9 23 108 98 CCDS HistoryNCBI Gene:71790Re-query CCDS DB by CCDS ID:50989.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50989.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000015846.8 ENSMUSP00000015846.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000015846.8Link to Ensembl Protein Viewer:ENSMUSP00000015846.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000015846Re-query CCDS DB by Protein ID:ENSMUSP00000015846
Original member Current member EBI ENSMUST00000107183.7 ENSMUSP00000102801.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000107183.7Link to Ensembl Protein Viewer:ENSMUSP00000102801.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000107183Re-query CCDS DB by Protein ID:ENSMUSP00000102801
Original member Current member EBI ENSMUST00000164406.7 ENSMUSP00000127424.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164406.7Link to Ensembl Protein Viewer:ENSMUSP00000127424.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000164406Re-query CCDS DB by Protein ID:ENSMUSP00000127424
Original member Current member NCBI NM_001085383.1 NP_001078852.1 Accepted alive Link to Nucleotide Sequence:NM_001085383.1Link to Protein Sequence:NP_001078852.1Re-query CCDS DB by Nucleotide ID:NM_001085383Re-query CCDS DB by Protein ID:NP_001078852Link to BLAST:NP_001078852.1
Original member NCBI NM_023628.2 NP_076117.2 Updated not alive Link to Nucleotide Sequence:NM_023628.2Link to Protein Sequence:NP_076117.2Re-query CCDS DB by Nucleotide ID:NM_023628Re-query CCDS DB by Protein ID:NP_076117
Current member NCBI NM_023628.3 NP_076117.2 Accepted alive Link to Nucleotide Sequence:NM_023628.3Link to Protein Sequence:NP_076117.2Re-query CCDS DB by Nucleotide ID:NM_023628Re-query CCDS DB by Protein ID:NP_076117Link to BLAST:NP_076117.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001078852.1 345 Q9JHQ0 345 100% 0 0
NP_076117.2 345 Q9JHQ0 345 100% 0 0

Chromosomal Locations for CCDS 50989.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 95296790 95296852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 95297237 95297359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 95300153 95300211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 95300302 95300397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 95300531 95300615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 95301092 95301151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 95301311 95301390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 95302335 95302425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 95302666 95302779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 95302986 95303080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 95305862 95305958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 95306332 95306406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGTCTGCGAGCTGTGGACCACTGGGAACATCTCTGACTCAGGAGATCCTCAGCTCCCTGGGTCTTGCCG
ACAAGACCGCAGCCTGGGGGACCCTGGGCACCCTCAGGACGTTCTTGAGTTTCAGTGTGGACAAGGATGT
ACAAAGACTGCTGAAGGCTATCGCAGGCCAAGGTGTGGACTATGATACCATTGTGGATGTACTGACCAAT
CGGAGCAGAGAGCAAAGACAGCTCATTTCTCGAGCCTTTCAAGAGCGCACCAAACAGGATCTATTGAAGT
CCTTGCAGGCAGCGCTCTCTGGCAATCTGGAGAAAATCGTGGTGGCTCTCCTACAGCCTGCAGCCCAATT
TGATGCCCAGGAACTGAGGACAGCCTTGAAGACCTCTGGTTCTGCTGAGGATGTAGCCTTGGAAATCCTG
GCCACCCGAGCAGCGCCCGGACTGCAGGCATGCCTGGCAGTATATAAGCATGACTTCCAGGTGGAGGCTG
AGGAAGATATCAGGACTGAGACCAATGGTATCCTGCAGGACCTGCTTCTGGCCCTGAGCAAGGGGGACCG
TGAGAGCTATTCTGGAATTATTGATTACAACTTGGAAGAACAAGATGTCCGGGCACTTCAGCAGGCTGGA
GAATCCAGTACAGCAGGGCAATGGGTCCTGCTCCTTACACAACGCAGTCCTGAACACCTCATCCGAGTGT
TTGATCAGTACCGGAGATGCACTGGCCAGGAACTGGAGGATGCTATCCGGAACTGTTTCCATGGAGATGC
CCAGCTGGCTCTGATCAGCCTAGCTTCCATGTTGAGAAACACAGCGCTGTACTTTGCTAACAAACTCCAC
CAAGCCCTTCAGGAAACTGAGCCTAATTTCCAAGTGCTGACGCGGGTCCTTATCTCCCGAAGCGAGAGTG
ACCTTCTAAGCATTCGGGCTGAGTTCAAGAAGAAATTTGGGAAGTCTCTCTATTCTTCTCTTCAGGATGT
AGTCAGAGGGGATTGTCGTTCAGCACTACTGGCCCTGTGTAGAGCTGAAGATATCTGA

Translation (345 aa):
MSASCGPLGTSLTQEILSSLGLADKTAAWGTLGTLRTFLSFSVDKDVQRLLKAIAGQGVDYDTIVDVLTN
RSREQRQLISRAFQERTKQDLLKSLQAALSGNLEKIVVALLQPAAQFDAQELRTALKTSGSAEDVALEIL
ATRAAPGLQACLAVYKHDFQVEAEEDIRTETNGILQDLLLALSKGDRESYSGIIDYNLEEQDVRALQQAG
ESSTAGQWVLLLTQRSPEHLIRVFDQYRRCTGQELEDAIRNCFHGDAQLALISLASMLRNTALYFANKLH
QALQETEPNFQVLTRVLISRSESDLLSIRAEFKKKFGKSLYSSLQDVVRGDCRSALLALCRAEDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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