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Report for CCDS27443.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27443.1 Public Mus musculus 15 Slc25a32 23 108 98 CCDS HistoryNCBI Gene:69906Re-query CCDS DB by CCDS ID:27443.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27443.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022908.9 ENSMUSP00000022908.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022908.9Link to Ensembl Protein Viewer:ENSMUSP00000022908.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000022908Re-query CCDS DB by Protein ID:ENSMUSP00000022908
Original member Current member NCBI NM_172402.3 NP_765990.2 Accepted alive Link to Nucleotide Sequence:NM_172402.3Link to Protein Sequence:NP_765990.2Re-query CCDS DB by Nucleotide ID:NM_172402Re-query CCDS DB by Protein ID:NP_765990Link to BLAST:NP_765990.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_765990.2 316 Q8BMG8 316 100% 0 0

Chromosomal Locations for CCDS 27443.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 39095970 39096108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39097520 39097665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39098129 39098242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39099873 39100033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39101983 39102068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39105832 39105982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39112348 39112501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGACAGGCCAGGGCCAGTCGGCTGCCGGGTCGGCGGCGTGGAGCGCGGTGTTCCGCCACGTCCGGTACG
AGAACCTGGTGGCTGGCGTGAGTGGCGGGGTCTTGTCCAACCTGGCGCTGCACCCGCTCGACCTCGTGAA
GATCCGCTTCGCTGTGAGTGATGGACTGGAAGTAAGACCAAAATATAAAGGAATTTTGCATTGCTTGGCT
ACCATTTGGAAAGTTGATGGACTACGAGGACTTTATCAAGGAGTAACCCCGAATGTGTGGGGTGCCGGTT
TATCCTGGGGACTCTACTTTTTCTTTTACAATGCCATCAAATCATATAAGACAGAGGGAAGAGCTGAACA
GTTAGAGCCATTAGAGTACCTCGTCTCAGCTGCTGAAGCTGGAGCCATGACTCTGTGCATTACAAACCCA
TTATGGGTGACGAAAACTCGCCTTATGTTACAATATGGTGGTGTTGCTAGCCCTTCACAGAGACAGTATA
AAGGAATGTTTGATGCACTTGTGAAAATATATAAATATGAAGGTGTGCGTGGATTATACAAGGGATTTGT
CCCTGGGCTGTTTGGAACATCACATGGTGCCCTTCAGTTTATGGCATATGAGTTGCTAAAGTTGAAGTAC
AACAAACACATCAATAGATTACCGGAAGCCCAGCTGAGTACAGCAGAATACATCTCTGTCGCAGCGCTAT
CCAAAATATTTGCCGTAGCAGCAACATACCCGTATCAGGTTGTGAGAGCCCGCCTTCAGGATCAGCATGT
GTCTTATGGTGGTGTAACAGATGTGATCACAAAGACGTGGAGGAAAGAAGGCATCGGTGGATTTTACAAA
GGAATTGCCCCCAATCTCATTAGAGTGACTCCAGCCTGCTGCATCACCTTTGTGGTTTATGAAAATGTCT
CTCACTTTTTATATGACCTTAGAGAAAAGAAAGTGAGCTAA

Translation (316 aa):
MTGQGQSAAGSAAWSAVFRHVRYENLVAGVSGGVLSNLALHPLDLVKIRFAVSDGLEVRPKYKGILHCLA
TIWKVDGLRGLYQGVTPNVWGAGLSWGLYFFFYNAIKSYKTEGRAEQLEPLEYLVSAAEAGAMTLCITNP
LWVTKTRLMLQYGGVASPSQRQYKGMFDALVKIYKYEGVRGLYKGFVPGLFGTSHGALQFMAYELLKLKY
NKHINRLPEAQLSTAEYISVAALSKIFAVAATYPYQVVRARLQDQHVSYGGVTDVITKTWRKEGIGGFYK
GIAPNLIRVTPACCITFVVYENVSHFLYDLREKKVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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