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Report for CCDS22397.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22397.1 Public Mus musculus 8 Bst2 23 108 98 CCDS HistoryNCBI Gene:69550Re-query CCDS DB by CCDS ID:22397.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22397.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051672.8 ENSMUSP00000051921.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051672.8Link to Ensembl Protein Viewer:ENSMUSP00000051921.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000051672Re-query CCDS DB by Protein ID:ENSMUSP00000051921
Original member Current member NCBI NM_198095.3 NP_932763.1 Accepted alive Link to Nucleotide Sequence:NM_198095.3Link to Protein Sequence:NP_932763.1Re-query CCDS DB by Nucleotide ID:NM_198095Re-query CCDS DB by Protein ID:NP_932763Link to BLAST:NP_932763.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_932763.1 172 Q8R2Q8 172 100% 0 0

Chromosomal Locations for CCDS 22397.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 71534690 71534792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71535786 71535825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71536359 71536434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71537128 71537427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (519 nt):
ATGGCGCCCTCTTTCTATCACTATCTGCCCGTGCCCATGGATGAGATGGGGGGGAAGCAAGGATGGGGCA
GCCACCGGCAGTGGCTGGGGGCCGCGATCTTGGTGGTCCTGTTCGGGGTTACCTTAGTCATCCTGACAAT
CTACTTCGCCGTCACAGCGAACAGCGTGGCCTGTAGAGACGGGTTGCGAGCGCAGGCTGAGTGCCGGAAC
ACCACGCACCTGTTGCAGCGCCAGCTCACCCGCACCCAGGACAGTCTGCTGCAGGCCGAGACACAGGCAA
ACTCCTGCAACCTGACCGTGGTGACCCTTCAGGAGTCCCTGGAGAAGAAGGTGTCTCAAGCCCTGGAGCA
GCAGGCCCGCATCAAGGAGCTTGAGAATGAAGTCACGAAGCTGAACCAGGAGCTGGAGAATCTGAGGATC
CAAAAGGAGACTTCTAGCACAGTGCAGGTGAACTCTGGCAGCTCCATGGTGGTCTCCAGCCTACTGGTGC
TCAAAGTGTCACTGTTCCTGCTCTTTTGA

Translation (172 aa):
MAPSFYHYLPVPMDEMGGKQGWGSHRQWLGAAILVVLFGVTLVILTIYFAVTANSVACRDGLRAQAECRN
TTHLLQRQLTRTQDSLLQAETQANSCNLTVVTLQESLEKKVSQALEQQARIKELENEVTKLNQELENLRI
QKETSSTVQVNSGSSMVVSSLLVLKVSLFLLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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