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Report for CCDS50183.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50183.1 Public Mus musculus 17 Cebpzos 23 108 98 CCDS HistoryNCBI Gene:68554Re-query CCDS DB by CCDS ID:50183.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50183.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063817.6 ENSMUSP00000068772.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063817.6Link to Ensembl Protein Viewer:ENSMUSP00000068772.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000063817Re-query CCDS DB by Protein ID:ENSMUSP00000068772
Original member Current member EBI ENSMUST00000180077.6 ENSMUSP00000136411.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000180077.6Link to Ensembl Protein Viewer:ENSMUSP00000136411.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000180077Re-query CCDS DB by Protein ID:ENSMUSP00000136411
Original member Current member NCBI NM_001177402.1 NP_001170873.1 Accepted alive Link to Nucleotide Sequence:NM_001177402.1Link to Protein Sequence:NP_001170873.1Re-query CCDS DB by Nucleotide ID:NM_001177402Re-query CCDS DB by Protein ID:NP_001170873Link to BLAST:NP_001170873.1
Original member Current member NCBI NM_001177403.1 NP_001170874.1 Accepted alive Link to Nucleotide Sequence:NM_001177403.1Link to Protein Sequence:NP_001170874.1Re-query CCDS DB by Nucleotide ID:NM_001177403Re-query CCDS DB by Protein ID:NP_001170874Link to BLAST:NP_001170874.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001170873.1 80 Q8BTE5 80 100% 0 0
NP_001170874.1 80 Q8BTE5 80 100% 0 0

Chromosomal Locations for CCDS 50183.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 78918358 78918472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78919056 78919100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 78919759 78919841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (243 nt):
ATGGCTCGGATCATGGAACCGCTGGCGAGGAAGATCTTTAAAGGAGTGCTAGCAGCTGAGCTTGTGGGTG
TCGCTGGAGCTTACTGTCTGTTTAAAAAGATGCACTCCAGCCAAGATTTCAGACAAACAATGAGCAAGAA
ATTTCCATTCATTTTGGAAGTTTATTACAAATCCATTGAACAGTCTGGAATGTATGGAGTTAGAGAGAAA
GATGAGGAAAAATGGTTGACTAGCAAAAACTAA

Translation (80 aa):
MARIMEPLARKIFKGVLAAELVGVAGAYCLFKKMHSSQDFRQTMSKKFPFILEVYYKSIEQSGMYGVREK
DEEKWLTSKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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