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Report for CCDS21207.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21207.1 Public Mus musculus 7 Aspdh 23 108 98 CCDS HistoryNCBI Gene:68352Re-query CCDS DB by CCDS ID:21207.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21207.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035929.10 ENSMUSP00000039202.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035929.10Link to Ensembl Protein Viewer:ENSMUSP00000039202.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000035929Re-query CCDS DB by Protein ID:ENSMUSP00000039202
Original member Current member NCBI NM_026690.1 NP_080966.1 Accepted alive Link to Nucleotide Sequence:NM_026690.1Link to Protein Sequence:NP_080966.1Re-query CCDS DB by Nucleotide ID:NM_026690Re-query CCDS DB by Protein ID:NP_080966Link to BLAST:NP_080966.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080966.1 287 Q9DCQ2 287 100% 0 0

Chromosomal Locations for CCDS 21207.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 44465472 44465535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44466090 44466234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44466471 44466555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44466664 44466813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44466885 44467105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44467179 44467333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44467643 44467686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (864 nt):
ATGGCCACCAGTACGCTCCCTCAAGTTCCTTACAAGGTGGGGGTGGTGGGCTATGGCCGCCTGGGACAGT
CCCTTGTGTCCCGCCTTCTGGCTCAGGGATCAGAACTGGGCCTAGAACTTGTTTTTGTGTGGAACCGTGA
CCCTGGACGGATGGCAGGGAGTGTGCCCCCTGCCCTGCAGCTCCAAGACCTCACTGCCCTTGAGGAAAGG
CACCCTGACCTTGTGGTAGAAGTGGCCCACCCCAAAATAATCCATGAATCTGGGGCACAAATCCTTCGCC
ATGCAAACCTCCTGGTGGGATCCCCCTCAGCTCTGGCTGACCAGACCACAGAGCAGCAGCTCCTGGAGGC
TTCAAAGCGCTGGGGCCACACTGTGTTTGTGGCCCGAGGGGCCCTATGGGGCAGTGAAGACATCAGCAGA
CTGGATGCAGCCGGAGGCCTCCAGAGCCTTCGAGTCACCATGGCCACACATCCTGATGGCTTCCGGCTGG
AGGGACCCCTGGCTGCAGCCCACAGTAGTGGGCCCCGCACAGTGCTCTATGAGGGCCCTGTGCGTGGGCT
CTGTCCCTTGGCCCCCCGAAACTCTAACACCATGGCAGCTGCTGCCCTGGCTGCCCCCAGTCTAGGCTTC
GACCGTGTCATTGGGGTGCTTGTGGCTGACCTTAGCCTCACCGACATGCACGTGGTGGATGTGGAGCTGC
TAGGACCCCCAGGGCCTTCAGGTCGCAGCTTTGCCGTGCACACCCACAGAGAGAACCCAGCCCAGCCTGG
CGCTGTCACCGGCTCTGCTACTGTTACAGCCTTCTGGCACAGCCTACTGGGCTGCTGTCAGCTCACCTCC
AGACCTGGGATCCACCTCTGCTGA

Translation (287 aa):
MATSTLPQVPYKVGVVGYGRLGQSLVSRLLAQGSELGLELVFVWNRDPGRMAGSVPPALQLQDLTALEER
HPDLVVEVAHPKIIHESGAQILRHANLLVGSPSALADQTTEQQLLEASKRWGHTVFVARGALWGSEDISR
LDAAGGLQSLRVTMATHPDGFRLEGPLAAAHSSGPRTVLYEGPVRGLCPLAPRNSNTMAAAALAAPSLGF
DRVIGVLVADLSLTDMHVVDVELLGPPGPSGRSFAVHTHRENPAQPGAVTGSATVTAFWHSLLGCCQLTS
RPGIHLC


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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