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Report for CCDS40769.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40769.1 Public Mus musculus 9 Dalrd3 23 108 98 CCDS HistoryNCBI Gene:67789Re-query CCDS DB by CCDS ID:40769.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40769.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000019183.13 ENSMUSP00000019183.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000019183.13Link to Ensembl Protein Viewer:ENSMUSP00000019183.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000019183Re-query CCDS DB by Protein ID:ENSMUSP00000019183
Original member Current member NCBI NM_026378.3 NP_080654.3 Accepted alive Link to Nucleotide Sequence:NM_026378.3Link to Protein Sequence:NP_080654.3Re-query CCDS DB by Nucleotide ID:NM_026378Re-query CCDS DB by Protein ID:NP_080654Link to BLAST:NP_080654.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080654.3 538 Q6PJN8-1 538 100% 0 0

Chromosomal Locations for CCDS 40769.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 108569911 108570075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108570150 108570445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108570564 108570814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108570892 108570971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108571045 108571173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108571446 108571519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108571613 108571674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108571782 108571864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108571941 108572117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108572187 108572297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108572393 108572461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 108572551 108572670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1617 nt):
ATGGCGACCGGGCGCCTTGGGGTTGGCGAGACGCTGGAGGCCCTTAATGCAGCTGTAGGGCCTGGTAGCC
CAGTGTGGTTTAAGGAAACCCATGCCCGGCACCTTCGTGTTCGAGACTTCTTGGCACCGCGAAGCGCGCT
ACAGGCGCGCTTCAGGGACGGCCAGGTGCCAGAGTGCGTGTTCCGTGCGGTCTCCTGCCTGCAGGGTCCC
GGAGTGGCCCCTGTACTGCGCTGCGCGCCGACACCCGCGGGTTTATCGCTCCAACTACAGCGGCCCGCTG
TCTTCGAACATGTACTCGGTGCCCTGGCCTCCTATGCTACTCCCGCCAAACCTGCCTCACCAGGCCCGCG
AGTTGTCCTACACTGCCCAGCACTGCGCTGTAATTCGGGGACGCTCCGATTGAGCCAGCTGCGTGCCGTG
CTCGTAGCCGATCATCTAGTACGGGTACTGCGTGCTCATGGGGTACGTGTGTGCTCAGTGCCCCCGGTGC
GGGACCCTCACATGTCAACTTTCCTCCAGAAACTTCGGGTGGAATGGCCCACTGCCTCGAAGAGCACCTC
GACCGAAACACTGAGAACCTGTGTTCTTGCAAACCTTAATGGTTCTAAGGAAGCGACGCTGCCCCCTGGC
GTCCTAGGCCGACTGTGTCTGAAGGAACTGGTAGAACAGAGAGGCACTGCTGGCTATGACCCCAGCATAG
ACCACTGTTTGGTGACTGAAGATGTGCTCTCTGTGCTCTCGGAGCTGCAGGAGGCTGTGCGCCACTGGCC
AGAGGGCGGCCACCCAGGCCCGGCTGGGCGTCCAGATGCTGGTGTAGATGACTGCGTGGTTATACACGTG
GTTAGCTGTGAAGAGGCATTCCAGCAACAAAAGCTGGATTTGCTCTGGCAGAAATTGGATGACCGGGCTC
CTCACAAGCAGAAACACCTGGTGTGTGGTCCCGTGAAAATGGCTGGTGTACCCGGCACCCAGCTGACTGC
CCCTCAGTACTACAGGCTCAGACATGCTCAGGTGTGCGAGGCCTCAGCTCTGAAGCACGGAGGAGACCTG
GCACAAGACCCCGCCTGGACTGAGACCTTCGACATCCTCTCCGTGGCTACCATCAAATTTGAGATGCTAA
GCACAGCCCCACAGAGCCAGCTCCTCCTGGCCCACAGCACCATCTCAACAAAGGGCACAAAGAGCGGGAC
TTTTGTCATGTATAACTGTGCCCGCCTTGCCACACTCTTCGAGGGCTACAAACATGGAACGGAGCAAGGT
CTGTATCCCACTTTTCCGCTTGTGAGCAGTCTGGACTTCTCACTACTCCATGATGAGGGTGAGTGGCTGC
TGCTTTTCAACAGTGTCCTTCCCTTTCTGGACCTGCTGAGCCAGACTGTGAGTCTGGCCGGCACCCCAGG
CCTCCACATCCCTGTCCGCACGGAGATGGTATGCAAGTTCCTGGTGCAGCTCAGCATGGATTTCAGCTCC
TACTATAACCGAGTACATATTCTAGGGGAACCTCGGCCACACCTCTTTGGTCAGATGTTTGCTCGCCTAC
AGCTTTTGAGGGCAGTGCGTGAGGTGTTCCACACAGGCTTGGCTATGCTGGGCCTCCCTCCGCTGAGCCA
CATCTAA

Translation (538 aa):
MATGRLGVGETLEALNAAVGPGSPVWFKETHARHLRVRDFLAPRSALQARFRDGQVPECVFRAVSCLQGP
GVAPVLRCAPTPAGLSLQLQRPAVFEHVLGALASYATPAKPASPGPRVVLHCPALRCNSGTLRLSQLRAV
LVADHLVRVLRAHGVRVCSVPPVRDPHMSTFLQKLRVEWPTASKSTSTETLRTCVLANLNGSKEATLPPG
VLGRLCLKELVEQRGTAGYDPSIDHCLVTEDVLSVLSELQEAVRHWPEGGHPGPAGRPDAGVDDCVVIHV
VSCEEAFQQQKLDLLWQKLDDRAPHKQKHLVCGPVKMAGVPGTQLTAPQYYRLRHAQVCEASALKHGGDL
AQDPAWTETFDILSVATIKFEMLSTAPQSQLLLAHSTISTKGTKSGTFVMYNCARLATLFEGYKHGTEQG
LYPTFPLVSSLDFSLLHDEGEWLLLFNSVLPFLDLLSQTVSLAGTPGLHIPVRTEMVCKFLVQLSMDFSS
YYNRVHILGEPRPHLFGQMFARLQLLRAVREVFHTGLAMLGLPPLSHI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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