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Report for CCDS12242.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12242.2 Public Homo sapiens 19 KRI1 24 110 108 CCDS HistoryNCBI Gene:65095Re-query CCDS DB by CCDS ID:12242.2See the combined annotation on chromosome 19 in Sequence Viewer

Public Note for CCDS 12242.1
The coding region has been updated to shorten the N-terminus to one that is more supported by conservation.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 12242.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312962.12 ENSP00000320917.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000312962.12Link to Ensembl Protein Viewer:ENSP00000320917.9Re-query CCDS DB by Nucleotide ID:ENST00000312962Re-query CCDS DB by Protein ID:ENSP00000320917
Original member Current member NCBI NM_023008.5 NP_075384.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_023008.5Link to Protein Sequence:NP_075384.4Re-query CCDS DB by Nucleotide ID:NM_023008Re-query CCDS DB by Protein ID:NP_075384Link to BLAST:NP_075384.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075384.4 703 Q8N9T8 703 100% 0 0

Chromosomal Locations for CCDS 12242.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 10553951 10554281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10555087 10555185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10555285 10555349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10557552 10557682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10557769 10557895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10557972 10558060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10558164 10558239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10559359 10559529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10559613 10559708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10559810 10559936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10560312 10560448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10561003 10561080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10561169 10561265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10561667 10561716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10561791 10561845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10562729 10562837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10564929 10565034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10565717 10565790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 10565906 10565999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2112 nt):
ATGCCGGAACCGCGCGGGTCGTCGCAGCTGCGGGTGAACGCGGCGTTTGCCGCGCGGTACAACCGCTACC
GGGAGCGCGAGGAACTGCAGCGGCTGAAGGATCGCTACGGGGACCGAGACAGCAGCAGCGACTCCAGCTC
CGAGTCGGACTCAAGCGACGAGCGCGTGGAATTTGATCCCCAGCAGGAGCGGGACTTTTACAAAACGCTC
TCCTTGTTGAAGAAGAAGGACCCCCGCATTTATCAGAAAGATGCCACCTTCTATAACAGAACAGCATCGT
CATCAGACAGTGAGGAGGACCCAGAAGCCTTGGAGAAGCAGAAGAAAGTGCGGCCCATGTACCTGAAGGA
CTACGAGAGGAAGGTTATCTTGGAGAAGGCAGGCAAATATGTTGATGAGGAGAACTCAGACGGGGAGACT
TCCAATCACAGACTCCAGGAGACATCGTCGCAAAGTTATGTGGAGGAACAGAAACAGCTCAAGGAAAGCT
TCCGGGCATTTGTGGAGGACAGTGAGGACGAGGACGGCGCTGGGGAGGGCGGCTCCAGTTTGCTGCAGAA
ACGTGCCAAAACCAGGCAGGAGAAGGCCCAGGAGGAGGCCGACTACATCGAGTGGCTGAAGGGACAGAAA
GAGATTCGGAACCCAGATTCCCTGAAGGAACTGACGCATCTCAAGGAATACTGGAACGACCCTGAGTTGG
ATGAAGGGGAGCGGTTCCTGCGGGATTACATCCTCAACAAACGCTATGAGGAGGAGGAAGAGGAGGAGGA
AGATGAAGAGGAAATGGAGGAAGAGGAGGGGGTCCACGGTCCCCCAGTCCAGCTGGCTGTGGACGACTCC
TCAGACGAAGGGGAGCTGTTTCTGAAGAAACAGGAGGACTTTGAACAGAAGTACAATTTCCGTTTCGAGG
AGCCGGACTCAGCATCGGTCAAGACCTACCCACGCAGCATCGCGTCCTCCGTGCGCCGTAAGGATGAGCG
CAGAAAGGAGAAGAGGGAAGAGACTCGGGAGCGAAAGAAGAGGGAGAAAGCAAAGAAGCAGGAAGAGCTC
AAGCAGCTGAAGAACCTGAAGAGGAAGGAGATTCTGGCCAAGCTGGAGAAGCTGCGGAAAGTAACAGGCA
ACGAGATGCTGGGCCTCGAGGAGGGGGACCTTGAAGACGACTTCGACCCTGCCCAGCACGACCAGCTCAT
GCAGAAGTGCTTTGGGGACGAGTACTACGGGGCCGTGGAGGAGGAGAAGCCACAATTTGAGGAAGAAGAA
GGGCTTGAAGACGACTGGAACTGGGACACGTGGGACGGGCCTGAGCAGGAGGGAGACTGGAGCCAGCAGG
AGCTGCACTGTGAGGACCCCAACTTCAACATGGACGCCGACTACGACCCCAGCCAGCCGAGGAAGAAAAA
GCGCGAGGCCCCCTTGACGGGCAAGAAGAAGCGCAAGTCGCCCTTCGCCGCGGCCGTGGGGCAGGAGAAG
CCCGTGTTTGAACCCGGGGACAAGACGTTCGAGGAGTACCTGGATGAGTATTACCGGCTGGACTACGAGG
ACATCATCGACGACCTGCCCTGTCGCTTCAAGTACCGCACAGTGGTGCCCTGTGACTTTGGCCTCAGCAC
TGAGGAGATCCTCGCTGCTGACGATAAGGAGCTGAACCGGTGGTGCTCCCTAAAGAAGACCTGCATGTAC
AGGTCAGAGCAGGAGGAGCTGCGGGACAAGCGGGCGTACAGCCAGAAGGCCCAGAACTCATGGAAAAAGC
GGCAGGTCTTCAAGTCACTCTGCCGAGAAGAGGCAGAGACACCTGCGGAAGCCACAGGGAAGCCACAGAG
AGATGAAGCCGGCCCACAGAGGCAGCTGCCAGCCCTTGATGGCAGCTTGATGGGGCCGGAGAGTCCCCCA
GCACAGGAAGAGGAAGCCCCTGTATCACCCCACAAGAAGCCAGCCCCCCAGAAGCGGAGGAGGGCCAAGA
AGGCACGGCTGCTGGGCCCCACTGTGATGCTTGGTGGATGCGAGTTCAGCCGCCAGAGACTGCAGGCCTT
TGGCCTCAACCCCAAACGGCTGCACTTCCGCCAGCTGGGCCGGCAGCGGAGGAAACAACAGGGGCCCAAG
AACAGCTCCTGA

Translation (703 aa):
MPEPRGSSQLRVNAAFAARYNRYREREELQRLKDRYGDRDSSSDSSSESDSSDERVEFDPQQERDFYKTL
SLLKKKDPRIYQKDATFYNRTASSSDSEEDPEALEKQKKVRPMYLKDYERKVILEKAGKYVDEENSDGET
SNHRLQETSSQSYVEEQKQLKESFRAFVEDSEDEDGAGEGGSSLLQKRAKTRQEKAQEEADYIEWLKGQK
EIRNPDSLKELTHLKEYWNDPELDEGERFLRDYILNKRYEEEEEEEEDEEEMEEEEGVHGPPVQLAVDDS
SDEGELFLKKQEDFEQKYNFRFEEPDSASVKTYPRSIASSVRRKDERRKEKREETRERKKREKAKKQEEL
KQLKNLKRKEILAKLEKLRKVTGNEMLGLEEGDLEDDFDPAQHDQLMQKCFGDEYYGAVEEEKPQFEEEE
GLEDDWNWDTWDGPEQEGDWSQQELHCEDPNFNMDADYDPSQPRKKKREAPLTGKKKRKSPFAAAVGQEK
PVFEPGDKTFEEYLDEYYRLDYEDIIDDLPCRFKYRTVVPCDFGLSTEEILAADDKELNRWCSLKKTCMY
RSEQEELRDKRAYSQKAQNSWKKRQVFKSLCREEAETPAEATGKPQRDEAGPQRQLPALDGSLMGPESPP
AQEEEAPVSPHKKPAPQKRRRAKKARLLGPTVMLGGCEFSRQRLQAFGLNPKRLHFRQLGRQRRKQQGPK
NSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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