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Report for CCDS73774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73774.1 Public Homo sapiens 15 GOLGA6L4 24 110 108 CCDS HistoryNCBI Gene:643707Re-query CCDS DB by CCDS ID:73774.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 73774.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000510439.7 ENSP00000421586.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000510439.7Link to Ensembl Protein Viewer:ENSP00000421586.2Re-query CCDS DB by Nucleotide ID:ENST00000510439Re-query CCDS DB by Protein ID:ENSP00000421586
Original member Current member NCBI NM_001267536.3 NP_001254465.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001267536.3Link to Protein Sequence:NP_001254465.2Re-query CCDS DB by Nucleotide ID:NM_001267536Re-query CCDS DB by Protein ID:NP_001254465Link to BLAST:NP_001254465.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001254465.2 574 A6NEF3 574 100% 0 0

Chromosomal Locations for CCDS 73774.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 84235835 84235918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84237586 84237705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84238328 84238387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84238573 84238653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84239318 84239405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84239788 84240782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84241049 84241109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84242147 84242249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 84242460 84242592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1725 nt):
ATGTGGCCCCAACCCCGCTTCCCTCCCCACCCCGCGATGTCAGAAAAAACACAACAGGGGAAATTGGCCG
CAGCCAAGAAAAAGTTAAAAGCATATTGGCAGAGGAAGAGCCCTGGCATTCCAGCAGGAGCTAACAGGAA
AAAGAAAATCAATGGCAGTAGCCCTGACACAGCCACTTCTGGTGGTTACCACTCACCTGGGGATTCAGCA
ACAGGTATCTACGGGGAGGGCCGTGCATCCTCTACTACCCTGGAGGATCTGGAGAGCCAGTACCAAGAAC
TAGCAGTGGCCCTGGATTCAAGCTCCGCAATAATCAGTCAACTCACTGAAAACATCAATTCACTGGTTCG
CACATCTAAGGAGGAGAAGAAGCATGAGATACATCTGGTACAGAAGCTTGGGAGGAGCTTGTTCAAACTC
AAAAACCAGACGGCTGAACCCCTGGCCCCAGAGCCCCCAGCAGGGCCATCTAAGGTAGAGCAGCTACAAG
ATGAGACCAACCACCTAAGGAAGGAGCTAGAGAGTGTGGGAAGACAGCTCCAGGCTGAGGTGGAAAACAA
TCAGATGTTGAGTCTCCTGAACAGGAGACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTACGTGAA
CAGGAGGAGAGGCTACGTGAACAGGAGGATAGGCTACATGAACAGGAGGAGAGGCTACGTGAACAGGAGG
AGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACATGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCT
ATGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTACATGAACAGGAGGAGAGGCTACGTGAA
CAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGG
AGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGAAGCTGCCAGGGCAGGAGAGGCTGCTGGA
AGAGGTGGAGAAGCTGTTAGAACAGGAGAGGCGGCAGGAGGAGCAGGAGAGGCTGCTGGAGAGGGAGAGG
CTGCTGGAAGAGGTGGAGAAGCTGTTAGAACAGGAGAGGCAGCAGGAGGAGCAGGAGAGGCTGCTGGAGA
GGGAGAGGCTGCTGGAAGAGGTGGAGAAGCTGTTAGAACAGGAGAGGCGGCAGGAGGAGCAGGAGAGGCT
GCTGGAGAGGGAGAGGCTGCTGGACGAGGTGGAGGAGCTCCTGGATGAGGTGGAGGAGCTCCTGGAGCAG
GAGAGGCTTCGGCAACAGGATGAGAGGCTGTGGCAGCAGGAGACTCTGCAGGAGCTGGAGAGGCTGCGGG
AGCTGGAGAGGCTGCGGGAGCTGGAGAGGATGCTGGAGCTGGGGTGGGAAGCCCTGTACGAGCAGCGGGC
CGAGCCACGCAGCGGCTTCGAGGAGCTGAACAACGAGAACAAGAGCACACTGCAGTTGGAGCAGCAAGTA
AAGGAGCTGAAGAAGTCGGGTGGAGCTGAAGAGCCAAGAGGCTCCGAGTCTGCAGCAGCAGCCAGACCAG
TAGCTGGAGCCCCAGTCCCACAAGGAGCTTGGATGTGCGGACAAGCAGGGTGGACTCCCCAGGAGCACCC
AGGCTTGAGTGGAGAAGCTGTTGGTACAGGAGAGGCGGCAGGAGGAGCAGGAGAGGCTGCATGCCATTCT
TTTCGGGCTGCGGAGAACAGGGAGCTAAACATCACCATCATCTAA

Translation (574 aa):
MWPQPRFPPHPAMSEKTQQGKLAAAKKKLKAYWQRKSPGIPAGANRKKKINGSSPDTATSGGYHSPGDSA
TGIYGEGRASSTTLEDLESQYQELAVALDSSSAIISQLTENINSLVRTSKEEKKHEIHLVQKLGRSLFKL
KNQTAEPLAPEPPAGPSKVEQLQDETNHLRKELESVGRQLQAEVENNQMLSLLNRRQEERLREQEERLRE
QEERLREQEDRLHEQEERLREQEERLCEQEERLREHEERLCEQEERLCEQEERLREQEERLHEQEERLRE
QEERLCEQEERLREQEERLCEQEERLREQEERLCEQEKLPGQERLLEEVEKLLEQERRQEEQERLLERER
LLEEVEKLLEQERQQEEQERLLERERLLEEVEKLLEQERRQEEQERLLERERLLDEVEELLDEVEELLEQ
ERLRQQDERLWQQETLQELERLRELERLRELERMLELGWEALYEQRAEPRSGFEELNNENKSTLQLEQQV
KELKKSGGAEEPRGSESAAAARPVAGAPVPQGAWMCGQAGWTPQEHPGLSGEAVGTGEAAGGAGEAACHS
FRAAENRELNITII


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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