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Report for CCDS50796.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50796.1 Public Mus musculus 2 Wfdc9 23 108 98 CCDS HistoryNCBI Gene:629754Re-query CCDS DB by CCDS ID:50796.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50796.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099095.3 ENSMUSP00000096693.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099095.3Link to Ensembl Protein Viewer:ENSMUSP00000096693.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000099095Re-query CCDS DB by Protein ID:ENSMUSP00000096693
Original member Current member EBI ENSMUST00000109335.7 ENSMUSP00000104959.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109335.7Link to Ensembl Protein Viewer:ENSMUSP00000104959.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109335Re-query CCDS DB by Protein ID:ENSMUSP00000104959
Original member NCBI NM_001160414.1 NP_001153886.1 Updated not alive Link to Nucleotide Sequence:NM_001160414.1Link to Protein Sequence:NP_001153886.1Re-query CCDS DB by Nucleotide ID:NM_001160414Re-query CCDS DB by Protein ID:NP_001153886
Current member NCBI NM_001160414.2 NP_001153886.1 Accepted alive Link to Nucleotide Sequence:NM_001160414.2Link to Protein Sequence:NP_001153886.1Re-query CCDS DB by Nucleotide ID:NM_001160414Re-query CCDS DB by Protein ID:NP_001153886Link to BLAST:NP_001153886.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001153886.1 83 Q3UW41 83 100% 0 0

Chromosomal Locations for CCDS 50796.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 164649787 164649817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164650485 164650626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164651685 164651763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (252 nt):
ATGAAGCCTTGGATCATCGTCCTCACTGTATCTGCCCATGGGATCCTGGTGTTTCTGCACGTTCTCGGAA
GCCTCAAGGATGACCTTGAAGAGATTGACCAGTGTTGGGTACAGCCTCCGACAAGGTTTTGTGGGAAAAG
GTGCACGAAGGTGCGGAAGTGCGTGAGTCCAAATTACACGTGCTGCTGGACTTACTGTGGAAACATCTGC
TTGAACAATGAAGAACCTTTTGAAACACTGATGAAAGTCTAG

Translation (83 aa):
MKPWIIVLTVSAHGILVFLHVLGSLKDDLEEIDQCWVQPPTRFCGKRCTKVRKCVSPNYTCCWTYCGNIC
LNNEEPFETLMKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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