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Report for CCDS31658.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31658.1 Public Homo sapiens 11 CEP126 24 110 108 CCDS HistoryNCBI Gene:57562Re-query CCDS DB by CCDS ID:31658.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31658.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263468.13 ENSP00000263468.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263468.13Link to Ensembl Protein Viewer:ENSP00000263468.8Re-query CCDS DB by Nucleotide ID:ENST00000263468Re-query CCDS DB by Protein ID:ENSP00000263468
Original member Current member NCBI NM_020802.4 NP_065853.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020802.4Link to Protein Sequence:NP_065853.3Re-query CCDS DB by Nucleotide ID:NM_020802Re-query CCDS DB by Protein ID:NP_065853Link to BLAST:NP_065853.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065853.3 1117 Q9P2H0 1117 100% 0 0

Chromosomal Locations for CCDS 31658.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 101915285 101915412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101922641 101922760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101944265 101944410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101948031 101948142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101958168 101958366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101961741 101963880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101978347 101978459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101981889 101981964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101986832 101987041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101992778 101992842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 101997599 101997643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3354 nt):
ATGCTGGCGGGGAGGCCCGGAACCCGGAGCGCGGTCGGGGAACTGGGCACTGAATCATCGGACAACCTCG
ACAGAGCCCCCCTCGGCCCTCGGGAGAGCGGCGGGCATCACCGACCTGGCTCTTACCTAGATATGAAAAT
CCATCTGGAGAAAAATTTAGAAGAAGAGCGCCAGATATTACTGCAGCAACAAAAAATATGTCGAAATCGA
GCACGTAAATATTTTGTGGAGTCAAATCGGAGAAAAAAAGCTTTTGAGGAGAAACGAAAAGAACAGGAAG
AAAAAGAACACCAAATTAGAGAACAAATACTTCAACAAAGAAAACAGAAGTTTGAAGAAGTTACTGAAAA
ATTCCAGCGTGCCCATGTTCCTCTTTCACAGCGGAGGAAAGCAGTTTCCCGAAAACCAGTTCCTCCATTA
GAAGAGGCCCTCAAACAAATTCAGGAATCCAACTTAAAATCAGAAGTAAACCTTCCCTTTTCCCGTAGAC
CAACAATAAACTGGAGAGCTATAGATTCTGCCTTGCCTTCCGCATTATCAAAAAATGATCACAAGCATCA
GAAACAACTCTTATCCAAAATCAATTGTGAGAAAGAAATGAATGAAAACATGAGGGCAACCTTGGCTACT
AGCAAAAATGTGTTCCAGCTTAAACTGGAGGAAACTCAGAAACTCCTCGAAGATCAACATCTAAGCAATT
TGCAAAAATTTTGTGATGAAGTTAATCAGATAACCAATTCTGAAACCCTCTCAAGTATAGACAGTCTTGA
GGCTACAGAGCATGAAGAAATATATTTAACACTTAATAAGGAGCATTCCACATCCATCCAGCGGAATACC
ATTTCCCTCAAACCAGCAAATATGCAATCAACTAATCTCAGCTGCTTTGATGAAGATAAACTGGCATTCT
CTAAAACTCAACATATAAATAATTGGCTTACAAATTTAGATGCTTCAAATACTCAGAATGTCACAGCTTT
CTCAGATATTTTAAGTAAATCTAATGTTCTGCCTTCATGGGAATATTTTAATAGTAAAGAACAAAATCCA
TCTCCTTTGAATGGAACAGTGGAAAGAGCCACAAATACTGCTAATAATTCAGTACCCTTTGTATCTAGCC
CACCCATGTTTGTACTAGATAAAAAATGTGAAAAGACCTCTGAAACTAGCACTATGAGGACAACTGACTC
CACTTCTGGAGCATTCAAAAGAGAGAGACCATTAGTTACTGAGAGCCCAACATTTAAATTTAGCAAATCC
CAAAGCACTTCAGATTCTCTAACCCAGGAAGTGGCTACATTTCCAGACCAAGAGAAATATTCTGAATTAA
ATCAAGAAAATGGAACTACTTCAATTCCTACTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATC
TAATATACAGTCAGCTAGACCTTCAGCAAAGAACAGTATACACATAAAAGAAATTGATGCAGTGCAGTGT
TCTGATAAGTTAGATGAATTGAAAGATGGTAAAGAAGAAGAGATAAAATATTTTAATTGCAATAAGGAAG
AGTTGCCTTTATTTTCAGACAGTTTTCAAGATGCCTATATACCTCACAATCCTGATTCAAAAGATGAAAA
ACAAAAATTAGCTGAAACATCATCCTTGTCTAATGTAACTTCTAATTATGACTTTGTTGGCCAGCATAAG
AAAATGAAATACAACATCCATGAGAGAAATGGTGTGAGATTTCTTAAAAGTATTTTAAAGAAAGAATCTA
AATATGAACATGGTTATCTTAAGGCATTAATTATAAATCAGAGCTTTAAGTTTGGAAATCAAAAAGCAGC
AGCTATCAGAGATAGTATTGAATTAACAAAGGAAAAAGGTGCAGAAATTCCAAAGACCATTAAAAAACTG
AGGTGGTTTGATGAAACTAGCAATATAGAAAACAATGCTGAAAACAGTCATTCACTGAAGAATAAAACAG
GAACAACTCAACAGCATTCTCAACAATTCCACATTCAAAGTGGTGCTGGAAGCAACATAATTAGTGTTTC
TACTTGTGCTGTAAATTCTGCTGATACAAAGAAGTCCAGGGAGGATTCTATCTCTGAAAATGTTACGACT
TTAGGAGGATCTGGAGCAGACCATATGCCTTTGAACTGTTTTATACCTTCAGGTTATAACTTTGCTAAAC
ATGCCTGGCCAGCCTCAAAAAAAGAAGAAAGTAAAATCCCTGTACATGATGATTCTAAAACTAAGCAAGG
TAAGCCACAAAGAGGTAGAGCAAAAATAATTAGAAAACCAGGATCTGCAAAAGTCCAATCAGGCTTTATA
TGTACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAACATATTTACACAAGCTC
AGGGAAAATTAATTATACCTTGTCCTCCTCCTCAATCTACATCAAATATTAGAAGTGGTAAAAATATACA
AGTGTCTCAGTGTCAACCAGTAACTCCTGAAAATCCTCAAAACATTATTACACATAACTCTTTTAATTCA
AAACATGTGCTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATG
CTTGTTCTGACCTAGTCACTGTGATACCATCACTGCCATCATATTGTTCTTCAGAGTGCCAAACTTTCGC
AAAAATAAATCATTCAAATGGCACTCAAGCAGTTGCCCGGCAAGATGCGACATTATATTGCACCCAAAGA
AGTCCTGTTTGTGAAGAAAGTTATCCGTCTGTGACTCTAAGAACTGCTGAAGAAGAATCAGTTCCCTTAT
GGAAAAGAGGTCCTAATGTCCTGCATCAAAATAAGAGGGCTACAGGGTCTACTGTTATGAGAAGAAAACG
AATTGCTGAAACTAAGCGGAGAAATATTTTAGAGCAGAAAAGACAAAACCCTGGATCTGTAGGACAGAAG
TACAGTGAGCAAATTAATAATTTTGGACAAAGTGTCCTGCTAAGTTCAAGTGAGCCAAAACAAACTACAA
GGGGTACTTCTTATATTGAAGAAGTTTCAGATAGTACTTCTGAGTTTTTGATGGCTGAAAACTTAGTGAA
AGCATCAGTGCCGGAGGATGAGATTCTGACTGTCTTGAATAGCAAACAGATACAGAAATCAAATCTACCT
TTAAATAAAACTCAACAATTCAACATCTGCACACTGTCAGCTGAAGAACAGAAGATCCTAGAGTCCCTTA
ATGATCTCAGTGAAAGACTACATTATATACAAGAATCCATTTGCAAAAACCCATCCATCAAAAATACTTT
ACAAATAATACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAA

Translation (1117 aa):
MLAGRPGTRSAVGELGTESSDNLDRAPLGPRESGGHHRPGSYLDMKIHLEKNLEEERQILLQQQKICRNR
ARKYFVESNRRKKAFEEKRKEQEEKEHQIREQILQQRKQKFEEVTEKFQRAHVPLSQRRKAVSRKPVPPL
EEALKQIQESNLKSEVNLPFSRRPTINWRAIDSALPSALSKNDHKHQKQLLSKINCEKEMNENMRATLAT
SKNVFQLKLEETQKLLEDQHLSNLQKFCDEVNQITNSETLSSIDSLEATEHEEIYLTLNKEHSTSIQRNT
ISLKPANMQSTNLSCFDEDKLAFSKTQHINNWLTNLDASNTQNVTAFSDILSKSNVLPSWEYFNSKEQNP
SPLNGTVERATNTANNSVPFVSSPPMFVLDKKCEKTSETSTMRTTDSTSGAFKRERPLVTESPTFKFSKS
QSTSDSLTQEVATFPDQEKYSELNQENGTTSIPTSCVPVATPLVLPSNIQSARPSAKNSIHIKEIDAVQC
SDKLDELKDGKEEEIKYFNCNKEELPLFSDSFQDAYIPHNPDSKDEKQKLAETSSLSNVTSNYDFVGQHK
KMKYNIHERNGVRFLKSILKKESKYEHGYLKALIINQSFKFGNQKAAAIRDSIELTKEKGAEIPKTIKKL
RWFDETSNIENNAENSHSLKNKTGTTQQHSQQFHIQSGAGSNIISVSTCAVNSADTKKSREDSISENVTT
LGGSGADHMPLNCFIPSGYNFAKHAWPASKKEESKIPVHDDSKTKQGKPQRGRAKIIRKPGSAKVQSGFI
CTNRKGAVIQPQSASKVNIFTQAQGKLIIPCPPPQSTSNIRSGKNIQVSQCQPVTPENPQNIITHNSFNS
KHVLPTEHSLNQWNQESSSPLSNACSDLVTVIPSLPSYCSSECQTFAKINHSNGTQAVARQDATLYCTQR
SPVCEESYPSVTLRTAEEESVPLWKRGPNVLHQNKRATGSTVMRRKRIAETKRRNILEQKRQNPGSVGQK
YSEQINNFGQSVLLSSSEPKQTTRGTSYIEEVSDSTSEFLMAENLVKASVPEDEILTVLNSKQIQKSNLP
LNKTQQFNICTLSAEEQKILESLNDLSERLHYIQESICKNPSIKNTLQIIPLLEKREDRTSSCRDKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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