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Report for CCDS32083.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32083.1 Public Homo sapiens 14 TXNDC16 24 110 108 CCDS HistoryNCBI Gene:57544Re-query CCDS DB by CCDS ID:32083.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32083.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000281741.9 ENSP00000281741.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000281741.9Link to Ensembl Protein Viewer:ENSP00000281741.4Re-query CCDS DB by Nucleotide ID:ENST00000281741Re-query CCDS DB by Protein ID:ENSP00000281741
Original member Current member NCBI NM_020784.3 NP_065835.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020784.3Link to Protein Sequence:NP_065835.2Re-query CCDS DB by Nucleotide ID:NM_020784Re-query CCDS DB by Protein ID:NP_065835Link to BLAST:NP_065835.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065835.2 825 Q9P2K2 825 100% 0 0

Chromosomal Locations for CCDS 32083.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 52432304 52432587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52439204 52439394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52440564 52440724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52455324 52455462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52457090 52457174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52470037 52470173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52470512 52470680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52482230 52482289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52482822 52482965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52488363 52488486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52490391 52490451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52490839 52491005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52511240 52511390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52514880 52514970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52519172 52519293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52536719 52536793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52537599 52537672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52542371 52542453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 52543398 52543557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2478 nt):
ATGTTTTCCGGCTTCAATGTCTTTAGAGTTGGGATCTCTTTTGTCATAATGTGCATTTTTTACATGCCAA
CAGTAAACTCTTTACCAGAACTGAGTCCTCAGAAATATTTTAGTACATTGCAACCAGGAAAAGCCTCTTT
AGCTTATTTTTGTCAAGCTGATTCCCCAAGAACATCTGTATTTCTTGAAGAACTGAATGAGGCTGTTAGA
CCTCTGCAGGACTATGGAATTTCAGTTGCCAAGGTTAATTGTGTCAAAGAAGAAATATCAAGATACTGTG
GAAAAGAAAAGGATTTGATGAAAGCATATTTATTCAAGGGCAACATATTGCTCAGAGAATTCCCTACTGA
CACCTTGTTTGATGTGAATGCCATTGTCGCCCATGTTCTCTTTGCTCTTCTTTTTAGTGAAGTGAAATAT
ATTACCAACCTGGAAGACCTTCAGAACATAGAAAATGCTCTGAAAGGAAAAGCAAATATTATATTCTCAT
ATGTAAGAGCCATTGGAATACCAGAGCACAGAGCAGTCATGGAAGCCGCTTTTGTGTATGGGACTACATA
CCAATTTGTCTTAACCACAGAAATTGCCCTTTTGGAAAGTATTGGCTCTGAGGATGTGGAATATGCACAT
CTCTACTTTTTTCATTGTAAACTAGTCTTGGACTTGACCCAGCAATGTAGAAGAACACTAATGGAACAGC
CATTGACTACACTGAACATTCACCTGTTTATTAAGACAATGAAAGCACCTCTGTTGACTGAAGTTGCTGA
AGATCCTCAACAAGTTTCAACTGTCCATCTCCAACTGGGCTTACCACTGGTTTTTATTGTTAGCCAACAG
GCTACTTATGAAGCTGATAGAAGAACTGCAGAATGGGTTGCTTGGCGTCTTCTGGGAAAAGCAGGAGTTC
TACTCTTGTTAAGGGACTCTTTGGAAGTGAACATTCCTCAAGATGCTAATGTGGTCTTCAAAAGAGCAGA
AGAGGGAGTTCCAGTGGAATTTTTGGTATTACATGATGTTGATTTAATAATATCTCATGTGGAAAATAAT
ATGCACATTGAGGAAATACAAGAAGATGAAGACAATGACATGGAAGGTCCAGATATAGATGTTCAGGATG
ATGAAGTGGCAGAAACTGTTTTCAGAGATAGGAAGAGAAAATTACCTTTGGAACTTACAGTGGAACTAAC
AGAAGAAACATTTAATGCAACAGTGATGGCTTCTGACAGCATAGTACTCTTCTATGCTGGTTGGCAAGCA
GTATCCATGGCATTTTTGCAATCCTATATTGATGTGGCAGTTAAACTGAAAGGCACATCTACTATGCTTC
TTACTAGAATAAACTGTGCAGATTGGTCTGATGTATGTACTAAGCAAAATGTTACTGAATTTCCTATCAT
AAAGATGTACAAGAAAGGCGAGAACCCAGTATCTTATGCTGGAATGTTAGGAACCGAAGATCTCCTAAAA
TTTATCCAGCTCAACAGGATTTCATATCCAGTGAATATAACATCGATCCAAGAAGCAGAAGAATATTTAA
GTGGGGAATTATATAAAGACCTCATCTTGTATTCTAGTGTGTCAGTATTGGGACTATTTAGTCCAACCAT
GAAAACAGCAAAAGAAGATTTTAGTGAAGCAGGAAACTACCTAAAAGGATATGTTATCACTGGAATTTAT
TCTGAAGAAGATGTTTTGCTACTGTCAACCAAATATGCTGCAAGTCTTCCAGCCCTGCTGCTTGCCAGAC
ACACAGAAGGCAAAATAGAGAGCATCCCACTAGCTAGCACACATGCACAAGACATAGTTCAAATAATAAC
AGATGCACTACTGGAAATGTTTCCGGAAATCACTGTGGAAAATCTTCCCAGTTATTTCAGACTTCAGAAA
CCATTATTGATTTTGTTCAGTGATGGCACTGTAAATCCTCAGTATAAAAAAGCAATATTGACACTGGTAA
AGCAGAAATACTTGGATTCATTTACTCCATGCTGGTTAAATCTAAAGAATACTCCAGTGGGGAGAGGAAT
CTTGAGGGCATATTTTGATCCTCTGCCTCCCCTTCCTCTTCTTGTTTTGGTGAATCTGCATTCAGGTGGC
CAAGTATTTGCATTTCCTTCAGACCAGGCTATAATTGAAGAAAACCTTGTATTGTGGCTGAAGAAATTAG
AAGCAGGACTAGAAAATCATATCACAATTTTACCTGCTCAAGAATGGAAACCTCCTCTTCCAGCTTATGA
TTTTCTAAGTATGATAGATGCCGCAACATCTCAACGTGGCACTAGGAAAGTTCCCAAGTGTATGAAAGAA
ACAGATGTGCAGGAGAATGATAAGGAACAACATGAAGATAAATCGGCAGTCAGAAAAGAACCGATTGAAA
CTCTGAGAATAAAGCATTGGAATAGAAGTAATTGGTTTAAAGAAGCAGAAAAATCATTTAGACGTGATAA
AGAGTTAGGATGCTCAAAAGTGAACTAA

Translation (825 aa):
MFSGFNVFRVGISFVIMCIFYMPTVNSLPELSPQKYFSTLQPGKASLAYFCQADSPRTSVFLEELNEAVR
PLQDYGISVAKVNCVKEEISRYCGKEKDLMKAYLFKGNILLREFPTDTLFDVNAIVAHVLFALLFSEVKY
ITNLEDLQNIENALKGKANIIFSYVRAIGIPEHRAVMEAAFVYGTTYQFVLTTEIALLESIGSEDVEYAH
LYFFHCKLVLDLTQQCRRTLMEQPLTTLNIHLFIKTMKAPLLTEVAEDPQQVSTVHLQLGLPLVFIVSQQ
ATYEADRRTAEWVAWRLLGKAGVLLLLRDSLEVNIPQDANVVFKRAEEGVPVEFLVLHDVDLIISHVENN
MHIEEIQEDEDNDMEGPDIDVQDDEVAETVFRDRKRKLPLELTVELTEETFNATVMASDSIVLFYAGWQA
VSMAFLQSYIDVAVKLKGTSTMLLTRINCADWSDVCTKQNVTEFPIIKMYKKGENPVSYAGMLGTEDLLK
FIQLNRISYPVNITSIQEAEEYLSGELYKDLILYSSVSVLGLFSPTMKTAKEDFSEAGNYLKGYVITGIY
SEEDVLLLSTKYAASLPALLLARHTEGKIESIPLASTHAQDIVQIITDALLEMFPEITVENLPSYFRLQK
PLLILFSDGTVNPQYKKAILTLVKQKYLDSFTPCWLNLKNTPVGRGILRAYFDPLPPLPLLVLVNLHSGG
QVFAFPSDQAIIEENLVLWLKKLEAGLENHITILPAQEWKPPLPAYDFLSMIDAATSQRGTRKVPKCMKE
TDVQENDKEQHEDKSAVRKEPIETLRIKHWNRSNWFKEAEKSFRRDKELGCSKVN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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