NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS40415.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40415.1 Public Mus musculus 8 Mast1 23 108 98 CCDS HistoryNCBI Gene:56527Re-query CCDS DB by CCDS ID:40415.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40415.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109741.8 ENSMUSP00000105363.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109741.8Link to Ensembl Protein Viewer:ENSMUSP00000105363.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000109741Re-query CCDS DB by Protein ID:ENSMUSP00000105363
Original member Current member NCBI NM_019945.2 NP_064329.2 Accepted alive Link to Nucleotide Sequence:NM_019945.2Link to Protein Sequence:NP_064329.2Re-query CCDS DB by Nucleotide ID:NM_019945Re-query CCDS DB by Protein ID:NP_064329Link to BLAST:NP_064329.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064329.2 1570 Q9R1L5 1570 100% 0 0

Chromosomal Locations for CCDS 40415.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 84911986 84913241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84913320 84913507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84915455 84915591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84915680 84915802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84916156 84916385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84916553 84916759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84917727 84917974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84918053 84918231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84918670 84918779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84920360 84920482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84920615 84920716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84920797 84920962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84921100 84921232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84921340 84921478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84923731 84923939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84924028 84924113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84925275 84925342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84925409 84925541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84925645 84925746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84928580 84928789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84928950 84929025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84929222 84929382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84930820 84930898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84935244 84935319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84935706 84935794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84937195 84937277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4713 nt):
ATGTCTGACTCTCTCTGGACCGCGCTTTCCAATTTCTCGATGCCCTCCTTCCCCGGCGGCAGCATGTTTC
GCCGCACCAAGAGTTGCCGTACCAGCAACCGGAAAAGCCTCATCCTGACAAGCACTTCTCCGACTCTACC
GCGACCCCACTCCCCGCTGCCGGGCCACTTAGGTAGCAGTCCTTTGGACAGCCCCCGCAACTTCTCTCCC
AACACTCCCGCCCACTTCTCGTTTGCTTCTTCCCGAAGGGCGGATGGACGCCGATGGTCGCTTGCTTCGC
TCCCTTCCTCTGGCTATGGCACCAACACGCCCAGCTCAACTGTTTCATCCTCCTGCTCCTCCCAGGAGCG
CCTGCATCAACTACCGTACCAGCCCACCGTGGACGAGCTGCACTTTCTGTCCAAACACTTCGGCAGCACC
GAGAGCATCACCGACGAGGATGGTGGCCGCCGCTCTCCCGCCGTGCGTCCTCGCTCTCGCAGCCTCAGCC
CCGGCCGCTCCCCCTCCTCCTACGACAACGAAATTGTGATGATGAACCATGTGTACAAGGAGCGGTTCCC
AAAGGCCACTGCACAGATGGAAGAGAAGCTGCGGGACTTCGCCCGCGCCTATGAACCTGACAGCGTGCTG
CCGCTGGCCGACGGCGTGCTCAGCTTCATCCACCATCAGATCATTGAACTGGCCCGAGACTGCCTTACCA
AGTCCCGCGATGGGCTCATCACCACGGTCTATTTCTATGAACTGCAGGAAAACCTAGAGAAGCTGCTGCA
GGACGCTTATGAACGCTCGGAGAGCTTGGAGGTAGCCTTTGTCACTCAGCTGGTGAAGAAACTTCTCATA
ATCATCTCTCGCCCTGCAAGGCTTCTGGAGTGCCTGGAATTCAACCCAGAAGAGTTCTACCACCTTCTGG
AGGCAGCCGAGGGACATGCCAAGGAGGGCCACCTGGTCAAAACTGACATCCCCCGATACATCATCCGACA
GCTGGGCCTCACTCGGGACCCCTTTCCAGATGTGGTGCGCCTGGAGGAGCAGGACAGCGGGGGCTCCAAC
ACTCCGGAGCAAGACGACACATCTGAGGGTCGCAGCAGCACCTCCAAGGCCAAGAAACCTCCCGGTGAAA
GTGACTTTGACACTATCAAGCTCATTAGCAATGGTGCCTACGGAGCCGTCTACCTGGTGCGGCACCGGGA
CACGAGGCAGCGCTTCGCCATGAAGAAGATCAACAAACAGAACCTGATCCTGCGCAACCAGATCCAGCAG
GCGTTTGTGGAGCGCGACATCCTCACGTTTGCAGAGAACCCATTTGTGGTCGGCATGTTCTGCTCCTTTG
AGACCCGGCGCCACCTTTGCATGGTCATGGAGTATGTGGAAGGTGGTGACTGTGCCACTCTCCTCAAGAA
CATTGGGGCACTGCCTGTGGAGATGGCGCGAATGTATTTTGCAGAAACAGTTCTAGCCCTTGAGTACTTA
CACAATTATGGCATCGTGCACCGTGACCTCAAGCCAGACAACCTCCTCATTACTTCCATGGGCCACATCA
AGCTCACGGATTTTGGCCTCTCCAAGATGGGACTCATGAGCCTGACCACCAACTTATATGAGGGGCACAT
TGAGAAGGATGCCCGGGAGTTCCTGGACAAACAGGTGTGTGGGACCCCAGAGTACATCGCACCCGAGGTC
ATCCTGCGCCAGGGCTACGGCAAGCCAGTGGACTGGTGGGCTATGGGGATCATTCTCTACGAGTTCCTGG
TGGGCTGTGTGCCTTTCTTCGGGGATACCCCAGAAGAGCTCTTTGGACAGGTCATCAGCGATGACATACT
GTGGCCTGAAGGGGACGAGGCCCTGCCCACAGATGCACAGCTTCTAATATCTAGCCTCTTGCAGACCAAC
CCCCTGGTCCGGCTTGGGGCAGGTGGTGCTTTTGAGGTGAAGCAGCATAGTTTCTTCCGAGACCTGGACT
GGACAGGGCTACTGCGGCAGAAGGCGGAGTTCATCCCCCACCTAGAGTCAGAAGATGACACCAGCTACTT
TGACACCCGCTCCGACAGGTATCACCATGTGAACTCCTATGATGAGGACGACACCACCGAAGAGGAGCCC
GTGGAGATCCGCCAATTCTCCTCCTGCTCGCCGCGCTTCAGCAAGGTGTACAGCAGTATGGAGCAGCTGT
CTCAGCACGAGCCTAAGACCCCCGTCTCAGCATCTGGGGCCAGCAAGCGGGACCCAAGCGCTAAGGGCCC
GGAGGAGAAAGTGGCCGGCAAGAGGGAGGGACTGGGTGGCCTGACTCTGCGTGAGAAGACCTGGAGAGGG
GGCTCTCCAGAGATTAAGCGCTTCTCAGCGTCTGAAGCCAGTTTTCTGGAAGGAGAGGCCAGTCCCCCGC
TGGGAGCGCGCAGACGTTTCTCAGCACTGCTGGAGCCCAGCCGCTTCACTGCCCCTCAAGAGGATGAAGA
TGAGGCTCGACTCCGCAGACCTCCTCGACCCAGCTCCGATCCCCCTAGCTCACTGGACACACGCGTCCCC
AAAGAGGCAGTTCAAGGAGAGGGCACGTCCACCCCCGGGGAACCCGAGGCCACTGAGCGCTCACATCCAG
GTGACCTCGGCCCACCCTCCAAGGATGGAGACCCATCAGGCCCTAGGGCCACCAACGACCTGGTTTTGCG
AAGGGCAAGGCACCAGCAGCTGTCTGGGGATCTTGCTGTGGAGAAGCGACCGTCTCGAACTGGGGGCAAA
GTTATCAAGTCGGCTTCAGCTACAGCCTTGTCAGTCATGATTCCTGCAGTGGACCCACATGGAGGCTCAC
CCCTGGCTAGTCCCATGTCCCCTCGATCTCTCTCCTCCAATCCATCCTCACGGGACTCTTCGCCTAGCCG
AGACTACTCACCAGCTGTCAGTGGACTCCGTTCCCCCATCACCATCCAACGCTCAGGCAAGAAATATGGG
TTCACACTGCGAGCCATCCGTGTCTACATGGGCGACTCCGATGTCTACAGTGTCCACCACATTGTTTGGC
ACGTGGAGGAAGGAGGCCCAGCCCAAGAGGCAGGGCTCTGTGCTGGGGACCTCATCACTCACGTGAATGG
TGAGCCCGTGCATGGTATGGTGCATCCTGAGGTGGTAGAGCTGATCCTGAAGAGTGGCAACAAAGTAGCT
GTGACCACCACACCCTTTGAAAACACTTCCATCCGGATTGGGCCTGCCAGGCGCAGCAGTTACAAAGCCA
AAATGGCCCGAAGGAACAAAAGGCCTTCGGCCAAAGACGGCCAGGAGAGCAAGAAGCGGAGCTCTCTCTT
TCGGAAGATCACAAAGCAGTCGAACCTGCTGCACACCAGTCGATCGCTGTCCTCTTTGAACCGGTCCTTG
TCGTCCAGCGACAGTCTTCCGGGCTCGCCCACGCACGGACTACCCGCACGCTCGCCCACACATAGCTATC
GCTCTACACCTGACTCCGCCTACCTAGGCGCCTCGTCACAGAGTAGCTCGCCAGCTTCCAGCACGCCTAA
TTCCCCCGCCTCATCCGCCTCGCACCACATCAGGCCCAGCACCTTGCACGGGCTGTCACCGAAACTACAC
CGCCAGTACCGCTCAGCGCGCTGTAAATCGGCTGGCAACATCCCGCTGTCACCTCTAGCGCACACACCAT
CCCCGACGCAGGCGTCGCCGCCGCCGCTGCCAGGCCACACGGTGGGCAGCTCACATACCACGCAGAGCTT
CCCTGCCAAACTACACTCATCGCCACCTGTCGTGCGCCCGCGCCCCAAAAGTGCAGAGCCACCACGCTCG
CCGTTGCTCAAGCGCGTGCAGTCAGCGGAGAAACTAGGGGCTTCGCTGGGAGCAGACAAGAAGGGCGCAC
TGCGCAAACACAGCCTGGAAGTGGGACACCCTGATTTCCGAAAGGACTTCCATGGTGAGCTGGCCCTGCA
TAGCCTCGCTGAGTCTGATGGTGAGACGCCTCCTATTGAGGGTCCTGGGGCGACCCGGCAGGTCGCCGTG
CGACGCCTGGGTCGCCAGGAATCACCCCTAAGCTTGGGCGCGGACCCGTTGCTACCCGATGGTGTCCAGA
GACCTATGGCGTCAAGCAAGGAGGATTCCGCGGGAGGTACAGAGGCTTGCACCCCACCTCGCGCGACAAC
CCCTGGGAGCCGGACCCTGGAGCGTGACTCGGGTTGCACAAGGCACCAGAGCGTGCAGACTGAGGATGGC
CCAGGTGGGGTGGCCAGGGCCCTGGCCAAGGCAGCGCTAAGTCCAGTGCAGGAACATGAGACAGGCCGGC
GCAGTAGCTCTGGTGAGGCAGGCACACCCCCGGTGCCCATTGTTGTAGAGCCTGCTCGGCCAGGGGTCAA
GACCCAGGCACCCCAGCCTCTGGGCACAGACTCCAAGGGATTGAAGGAACCTGTAGCCCAGATGCCTCTG
ATGCCTGATGCCCCAAGGGGCAGGGAGCGCTGGGTGCTAGAGGAGGTGGAAGAGCGGACCACGCTAAGCG
GACTTCGCTCTAAGCCCGCCTCCCCCAAACTCTCTCCTGACCCCCAGACTCCAACCCTAGTCCCAACAAA
GAATGTACCCCGCAGTGCAGCTCCTTCAGTCCCACCTGCTTCCCTCATGGTCCCAGGCACCAAGCCTGAA
GCAGGGTTGAACTCCCGGTGTCCTGCTGAAGCTGTGACTCCTGCAGGCCTCACCAAAACTGGGGCACCTA
GCCCTGCATCTCTAGGTCCATAG

Translation (1570 aa):
MSDSLWTALSNFSMPSFPGGSMFRRTKSCRTSNRKSLILTSTSPTLPRPHSPLPGHLGSSPLDSPRNFSP
NTPAHFSFASSRRADGRRWSLASLPSSGYGTNTPSSTVSSSCSSQERLHQLPYQPTVDELHFLSKHFGST
ESITDEDGGRRSPAVRPRSRSLSPGRSPSSYDNEIVMMNHVYKERFPKATAQMEEKLRDFARAYEPDSVL
PLADGVLSFIHHQIIELARDCLTKSRDGLITTVYFYELQENLEKLLQDAYERSESLEVAFVTQLVKKLLI
IISRPARLLECLEFNPEEFYHLLEAAEGHAKEGHLVKTDIPRYIIRQLGLTRDPFPDVVRLEEQDSGGSN
TPEQDDTSEGRSSTSKAKKPPGESDFDTIKLISNGAYGAVYLVRHRDTRQRFAMKKINKQNLILRNQIQQ
AFVERDILTFAENPFVVGMFCSFETRRHLCMVMEYVEGGDCATLLKNIGALPVEMARMYFAETVLALEYL
HNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKMGLMSLTTNLYEGHIEKDAREFLDKQVCGTPEYIAPEV
ILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDILWPEGDEALPTDAQLLISSLLQTN
PLVRLGAGGAFEVKQHSFFRDLDWTGLLRQKAEFIPHLESEDDTSYFDTRSDRYHHVNSYDEDDTTEEEP
VEIRQFSSCSPRFSKVYSSMEQLSQHEPKTPVSASGASKRDPSAKGPEEKVAGKREGLGGLTLREKTWRG
GSPEIKRFSASEASFLEGEASPPLGARRRFSALLEPSRFTAPQEDEDEARLRRPPRPSSDPPSSLDTRVP
KEAVQGEGTSTPGEPEATERSHPGDLGPPSKDGDPSGPRATNDLVLRRARHQQLSGDLAVEKRPSRTGGK
VIKSASATALSVMIPAVDPHGGSPLASPMSPRSLSSNPSSRDSSPSRDYSPAVSGLRSPITIQRSGKKYG
FTLRAIRVYMGDSDVYSVHHIVWHVEEGGPAQEAGLCAGDLITHVNGEPVHGMVHPEVVELILKSGNKVA
VTTTPFENTSIRIGPARRSSYKAKMARRNKRPSAKDGQESKKRSSLFRKITKQSNLLHTSRSLSSLNRSL
SSSDSLPGSPTHGLPARSPTHSYRSTPDSAYLGASSQSSSPASSTPNSPASSASHHIRPSTLHGLSPKLH
RQYRSARCKSAGNIPLSPLAHTPSPTQASPPPLPGHTVGSSHTTQSFPAKLHSSPPVVRPRPKSAEPPRS
PLLKRVQSAEKLGASLGADKKGALRKHSLEVGHPDFRKDFHGELALHSLAESDGETPPIEGPGATRQVAV
RRLGRQESPLSLGADPLLPDGVQRPMASSKEDSAGGTEACTPPRATTPGSRTLERDSGCTRHQSVQTEDG
PGGVARALAKAALSPVQEHETGRRSSSGEAGTPPVPIVVEPARPGVKTQAPQPLGTDSKGLKEPVAQMPL
MPDAPRGRERWVLEEVEERTTLSGLRSKPASPKLSPDPQTPTLVPTKNVPRSAAPSVPPASLMVPGTKPE
AGLNSRCPAEAVTPAGLTKTGAPSPASLGP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH