NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10023.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10023.1 Public Homo sapiens 15 NSMCE3 24 110 108 CCDS HistoryNCBI Gene:56160Re-query CCDS DB by CCDS ID:10023.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10023.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332303.6 ENSP00000330694.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332303.6Link to Ensembl Protein Viewer:ENSP00000330694.4Re-query CCDS DB by Nucleotide ID:ENST00000332303Re-query CCDS DB by Protein ID:ENSP00000330694
Original member Current member NCBI NM_138704.4 NP_619649.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138704.4Link to Protein Sequence:NP_619649.1Re-query CCDS DB by Nucleotide ID:NM_138704Re-query CCDS DB by Protein ID:NP_619649Link to BLAST:NP_619649.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_619649.1 304 Q96MG7 304 100% 0 0

Chromosomal Locations for CCDS 10023.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 29268791 29269705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGTTGCAAAAACCGAGGAACCGGGGCCGCTCTGGCGGCCAGGCCGAGAGGGACAGAGACTGGAGCCATA
GCGGAAACCCCGGGGCTTCGCGGGCCGGGGAAGACGCCCGGGTTCTCAGAGACGGCTTTGCCGAGGAGGC
CCCGAGCACGTCCCGCGGGCCGGGCGGCTCGCAGGGGTCGCAGGGCCCCTCGCCTCAGGGCGCCCGCCGG
GCCCAGGCCGCCCCCGCCGTGGGGCCCAGGAGCCAGAAGCAGCTGGAGCTGAAAGTGTCCGAGCTGGTGC
AGTTCTTGCTGATTAAAGACCAGAAGAAGATTCCGATCAAGCGGGCCGACATACTGAAGCACGTCATCGG
GGACTACAAGGACATCTTCCCCGACCTCTTCAAACGGGCCGCCGAGCGCCTCCAGTACGTCTTCGGGTAT
AAGCTGGTGGAACTTGAACCCAAGAGCAACACTTACATCCTCATCAACACCCTGGAGCCTGTGGAGGAGG
ATGCCGAGATGAGGGGTGACCAAGGCACGCCCACTACGGGCCTCCTGATGATCGTCTTAGGGCTCATCTT
TATGAAGGGCAACACCATCAAGGAAACTGAAGCCTGGGACTTTCTGCGGCGCTTAGGGGTCTACCCCACC
AAGAAGCATTTAATTTTCGGAGATCCAAAGAAACTCATTACTGAGGACTTTGTGCGACAGCGTTACCTGG
AATACCGGCGGATACCCCACACCGACCCCGTCGACTACGAATTCCAGTGGGGCCCGCGAACCAACCTGGA
AACCAGCAAGATGAAAGTTCTTAAGTTTGTGGCCAAGGTCCATAATCAAGACCCCAAGGACTGGCCAGCG
CAGTACTGTGAGGCTTTGGCAGATGAGGAGAACAGGGCCAGACCTCAGCCTAGTGGCCCAGCTCCATCCT
CTTGA

Translation (304 aa):
MLQKPRNRGRSGGQAERDRDWSHSGNPGASRAGEDARVLRDGFAEEAPSTSRGPGGSQGSQGPSPQGARR
AQAAPAVGPRSQKQLELKVSELVQFLLIKDQKKIPIKRADILKHVIGDYKDIFPDLFKRAAERLQYVFGY
KLVELEPKSNTYILINTLEPVEEDAEMRGDQGTPTTGLLMIVLGLIFMKGNTIKETEAWDFLRRLGVYPT
KKHLIFGDPKKLITEDFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPA
QYCEALADEENRARPQPSGPAPSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH