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Report for CCDS14534.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14534.1 Public Homo sapiens X TEX13B 24 110 108 CCDS HistoryNCBI Gene:56156Re-query CCDS DB by CCDS ID:14534.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14534.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302917.1 ENSP00000303777.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302917.1Link to Ensembl Protein Viewer:ENSP00000303777.1Re-query CCDS DB by Nucleotide ID:ENST00000302917Re-query CCDS DB by Protein ID:ENSP00000303777
Original member Current member NCBI NM_031273.2 NP_112563.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031273.2Link to Protein Sequence:NP_112563.1Re-query CCDS DB by Nucleotide ID:NM_031273Re-query CCDS DB by Protein ID:NP_112563Link to BLAST:NP_112563.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112563.1 312 Q9BXU2 312 100% 0 0

Chromosomal Locations for CCDS 14534.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 107981080 107981559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 107981669 107982127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGCCTTGAGACCTGAGGACCCCAGTAGTGGGTTCCGGCACGGAAACGTGGTGGCCTTCATCATCGAGA
AAATGGCCAGGCACACGAAAGGCCCCGAGTTCTACTTCGAGAATATATCCTTATCCTGGGAGGAGGTGGA
AGACAAGCTCAGGGCCATCCTGGAGGACAGCGAGGTGCCCAGCGAGGTCAAAGAGGCCTGCACCTGGGGC
AGCCTGGCCTTGGGTGTGCGCTTTGCCCACAGGCAGGGGCAGTTACAAAACCGCAGGGTGCAGTGGCTGC
AAGGCTTTGCCAAACTGCACAGATCAGCTGCGCTGGTCTTGGCCTCAAACCTGACGGAACTCAAGGAACA
GCAGGAGATGGAATGCAATGAGGCGACCTTCCAGTTGCAGCTAACCGAGACCAGCCTTGCGGAGGTGCAG
AGAGAGCGGGACATGCTGAGATGGAAGCTCTTCCATGCCGAGCTGGCACCTCCCCAGGGACAGGGCCAGG
CTACAGTGTTTCCAGGCCTGGCCACTGCCGGAGGGGATTGGACAGAAGGAGCAGGTGAGCAGGAAAAGGA
GGCGGTGGCTGCTGCTGGTGCTGCTGGAGGAAAAGGAGAGGAGAGGTATGCAGAGGCAGGGCCTGCCCCC
GCAGAGGTCTTGCAGGGGCTGGGAGGAGGCTTCAGGCAGCCCCTCGGAGCTATTGTAGCAGGCAAATTAC
ACCTTTGCGGGGCAGAGGGAGAAAGATCTCAGGTCAGTACAAACAGCCATGTCTGTCTTCTCTGGGCTTG
GGTCCACAGTCTCACTGGAGCCTCTTCCTGTCCAGCTCCCTACCTCATTCACATACTCATACCCATGCCC
TTTGTCCGCCTTCTCAGCCATACCCAATATACCCCCTTCACCAGCAAAGGTCACAGAACGGGTTCCAACT
CAGATGCCTTTCAACTGGGGGGCCTCTGA

Translation (312 aa):
MALRPEDPSSGFRHGNVVAFIIEKMARHTKGPEFYFENISLSWEEVEDKLRAILEDSEVPSEVKEACTWG
SLALGVRFAHRQGQLQNRRVQWLQGFAKLHRSAALVLASNLTELKEQQEMECNEATFQLQLTETSLAEVQ
RERDMLRWKLFHAELAPPQGQGQATVFPGLATAGGDWTEGAGEQEKEAVAAAGAAGGKGEERYAEAGPAP
AEVLQGLGGGFRQPLGAIVAGKLHLCGAEGERSQVSTNSHVCLLWAWVHSLTGASSCPAPYLIHILIPMP
FVRLLSHTQYTPFTSKGHRTGSNSDAFQLGGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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