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Report for CCDS33265.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33265.1 Public Homo sapiens 2 POU3F3 24 110 108 CCDS HistoryNCBI Gene:5455Re-query CCDS DB by CCDS ID:33265.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 33265.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361360.4 ENSP00000355001.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361360.4Link to Ensembl Protein Viewer:ENSP00000355001.2Re-query CCDS DB by Nucleotide ID:ENST00000361360Re-query CCDS DB by Protein ID:ENSP00000355001
Original member Current member EBI ENST00000674056.1 ENSP00000501036.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674056.1Link to Ensembl Protein Viewer:ENSP00000501036.1Re-query CCDS DB by Nucleotide ID:ENST00000674056Re-query CCDS DB by Protein ID:ENSP00000501036
Original member Current member NCBI NM_006236.3 NP_006227.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006236.3Link to Protein Sequence:NP_006227.1Re-query CCDS DB by Nucleotide ID:NM_006236Re-query CCDS DB by Protein ID:NP_006227Link to BLAST:NP_006227.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006227.1 500 P20264 500 100% 0 0

Chromosomal Locations for CCDS 33265.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 104855511 104857013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1503 nt):
ATGGCCACGGCGGCTTCTAACCCCTACCTGCCGGGGAACAGCCTGCTCGCGGCCGGCTCTATTGTGCACT
CGGACGCGGCAGGGGCTGGCGGCGGCGGGGGTGGCGGCGGCGGCGGCGGCGGGGGCGGCGCAGGGGGCGG
GGGCGGCGGCATGCAGCCGGGCAGCGCCGCCGTGACCTCGGGCGCCTACCGGGGGGACCCGTCCTCTGTC
AAGATGGTCCAGAGCGACTTCATGCAGGGGGCCATGGCCGCCAGCAACGGCGGCCATATGCTGAGCCACG
CGCACCAGTGGGTCACAGCCCTGCCCCACGCCGCCGCCGCCGCCGCCGCTGCCGCCGCCGCCGCCGTGGA
GGCGAGCTCGCCGTGGTCGGGCAGCGCCGTGGGCATGGCTGGCAGCCCCCAGCAGCCACCGCAGCCGCCG
CCGCCACCGCCGCAGGGCCCCGACGTGAAGGGCGGCGCCGGGCGCGACGACCTGCACGCGGGCACAGCGC
TGCACCACCGCGGGCCGCCGCACCTCGGACCCCCGCCGCCGCCCCCACACCAGGGCCACCCTGGGGGCTG
GGGGGCGGCCGCCGCTGCCGCAGCCGCAGCCGCCGCCGCCGCCGCCGCCGCGCACCTCCCGTCCATGGCC
GGGGGCCAGCAGCCGCCGCCGCAGAGTCTGCTCTACTCGCAGCCCGGAGGCTTCACGGTGAACGGCATGC
TGAGCGCGCCACCGGGGCCCGGCGGCGGCGGCGGCGGCGCGGGCGGTGGAGCCCAGAGCTTGGTGCACCC
GGGGCTGGTGCGCGGGGACACGCCAGAGCTGGCCGAGCACCACCACCACCACCACCACCACGCGCATCCT
CACCCGCCGCACCCGCACCACGCGCAGGGACCCCCGCACCACGGCGGCGGCGGCGGCGGCGCGGGGCCTG
GACTCAACAGCCACGACCCGCACTCGGACGAGGACACGCCGACGTCGGACGACCTGGAGCAGTTCGCCAA
GCAGTTCAAGCAGCGGCGCATCAAGCTGGGCTTCACGCAGGCCGACGTGGGGTTGGCGCTGGGCACACTC
TACGGCAACGTGTTCTCGCAGACCACCATCTGCCGCTTCGAGGCCCTGCAGCTGAGCTTCAAGAACATGT
GCAAGCTCAAGCCGCTGCTGAACAAGTGGCTGGAGGAGGCGGACTCAAGCACCGGCAGCCCCACAAGCAT
CGACAAGATCGCGGCGCAGGGCCGCAAGCGCAAGAAGCGGACCTCTATCGAGGTGAGCGTCAAGGGCGCG
CTGGAGAGCCACTTCCTCAAGTGCCCCAAGCCCTCCGCGCAGGAGATCACCAACCTGGCCGACAGCCTGC
AGCTCGAGAAGGAGGTGGTGCGGGTCTGGTTCTGCAATCGGCGCCAAAAGGAGAAGCGCATGACGCCGCC
CGGGATCCAACAGCAGACGCCCGACGACGTCTACTCGCAGGTGGGCACCGTGAGCGCCGACACGCCGCCG
CCTCACCACGGGCTGCAGACGAGCGTTCAGTGA

Translation (500 aa):
MATAASNPYLPGNSLLAAGSIVHSDAAGAGGGGGGGGGGGGGGAGGGGGGMQPGSAAVTSGAYRGDPSSV
KMVQSDFMQGAMAASNGGHMLSHAHQWVTALPHAAAAAAAAAAAAVEASSPWSGSAVGMAGSPQQPPQPP
PPPPQGPDVKGGAGRDDLHAGTALHHRGPPHLGPPPPPPHQGHPGGWGAAAAAAAAAAAAAAAAHLPSMA
GGQQPPPQSLLYSQPGGFTVNGMLSAPPGPGGGGGGAGGGAQSLVHPGLVRGDTPELAEHHHHHHHHAHP
HPPHPHHAQGPPHHGGGGGGAGPGLNSHDPHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTL
YGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGA
LESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRMTPPGIQQQTPDDVYSQVGTVSADTPP
PHHGLQTSVQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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