NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS26645.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26645.1 Public Mus musculus 13 Lrrc14b 23 108 98 CCDS HistoryNCBI Gene:432779Re-query CCDS DB by CCDS ID:26645.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26645.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022064.4 ENSMUSP00000022064.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022064.4Link to Ensembl Protein Viewer:ENSMUSP00000022064.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022064Re-query CCDS DB by Protein ID:ENSMUSP00000022064
Original member Current member NCBI NM_001033042.3 NP_001028214.1 Accepted alive Link to Nucleotide Sequence:NM_001033042.3Link to Protein Sequence:NP_001028214.1Re-query CCDS DB by Nucleotide ID:NM_001033042Re-query CCDS DB by Protein ID:NP_001028214Link to BLAST:NP_001028214.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028214.1 510 Q3UJB3 510 100% 0 0

Chromosomal Locations for CCDS 26645.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 74360754 74361399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 74363073 74363959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1533 nt):
ATGAGGTCGCTTCGTTTCATTTCTGCTGAAGCGTTAGTGTCCCACTCCCAGCTGGTCCAGGAGAACCTGG
ACAATATAGCCTACAACCTCTACCCACTTCTGTTCAAGGCCAGTTACCTGCTAGAGCAGGCAGATGTAAC
CCGTGCTCTGCTGAGTCACTGGCCACTGGAGGAGTTCCGGCTGGCTGTGCTACTGAGGCCAAACACTGAC
CACCCTGAAGACCTGCGTGATCGTGCCTGCAAGGCCTGCCTGGAGGCCTGTATGCAGGGCATAGCTGACC
ATGTGCTGAAAAGTGGGAGCAACCGCCTTCGGGTAGCTGATTTCACCGGCATCCAGGACGTACAGGTGCA
GCAATGTCCTTGTGGGAGGGCACTAGGAAGGTGGGGCCGTACCAAGGTGCTGGCCAGGACCTGCTGCCAG
CTCCAAGGACAGCCCTGTTCAGCTGGGCACCCCATTGAAGTCTTTGCTGACCTCTTTGTCACAGAAGGCA
ACTTTGACATGGTGGTGCAGGCCCTGAAGCCATTAGGCCCAGCACCTCTGCAGGTCTGTTGCCCTTCACT
CCGGGCAGACAGCCTGAGCCCTGGGCAGCTCCTACAAGTTCTTGGCCTGGCTGGGCCAGGCAACCTTAGA
AAGTTGGAGGTAGTACACAATGTCCGGCTGCATGCTGGCCATGTGCAGCAGCTGCTGACCCAGGTGGGCT
TCCCTCAGCTGACCTCACTCACCTTGCCCACCAAGGCCTTCGATGCTCCCCCAACTTGTGCCCCAGATCC
AGAGGGCGAGGATCTTCTCCTTACCTCTATTGCCTGGGAGCTCAGCCAGATGAACCAGCTCACTGAGCTA
AGTGTGGCTTTCTCTACACTCACTGGGAAGATCCAAACATTGCTTAGCCCCTTGAAGACCCCACTAAGAG
TGTTGGACCTAGCCAACTGTGCCCTTAATCATGAAGACATATCCTTCTTAGCAGACTGTAACCACACTGC
CCACTTGGAGGTGCTGGACCTCAGTGGACACAACCTGGTACACCTGTACCCTTCTACCTTCTTCAGGCTG
CTGAGCCAGGCTGCCCAAACACTGAGAGTGCTCACCCTCGAGGAGTGCAACATCACAGACAGCCATGTTA
ACATGATGATTCTGGGCCTTAGCCCTTGCAGCCAGCTCCAGCAGTTCAAGTTTCTTGGAAACCCGCTCTC
AGGCAGTGCTCTCCGGCGCCTTTTTGCTGCACTCTGCGAACTCCCTAGGCTTCGCCATATTGAGTTCCCA
GTACCAAAGGACTGCTACCCCGAGGGTGCCATCTACCCTCAGGATGAACTGTCAGTGTCCAAATTCGACC
AACAGAAATACGACGTGATTGCAGAGGATCTTCGAGCAGTACTGCTTCGAGCTAACCGGGAGGACATCCA
GGTCTCCACCCCACTTTTTGGAAGTTTTGATCCAGACATTCATGAAACCAGCAATGAACTTGGTACTTTT
TTGCTGCAAGCTTTCAAAACTGCTTTGGAAAACTTTTCCAGAGCACTAGAACAAATGGAGTAG

Translation (510 aa):
MRSLRFISAEALVSHSQLVQENLDNIAYNLYPLLFKASYLLEQADVTRALLSHWPLEEFRLAVLLRPNTD
HPEDLRDRACKACLEACMQGIADHVLKSGSNRLRVADFTGIQDVQVQQCPCGRALGRWGRTKVLARTCCQ
LQGQPCSAGHPIEVFADLFVTEGNFDMVVQALKPLGPAPLQVCCPSLRADSLSPGQLLQVLGLAGPGNLR
KLEVVHNVRLHAGHVQQLLTQVGFPQLTSLTLPTKAFDAPPTCAPDPEGEDLLLTSIAWELSQMNQLTEL
SVAFSTLTGKIQTLLSPLKTPLRVLDLANCALNHEDISFLADCNHTAHLEVLDLSGHNLVHLYPSTFFRL
LSQAAQTLRVLTLEECNITDSHVNMMILGLSPCSQLQQFKFLGNPLSGSALRRLFAALCELPRLRHIEFP
VPKDCYPEGAIYPQDELSVSKFDQQKYDVIAEDLRAVLLRANREDIQVSTPLFGSFDPDIHETSNELGTF
LLQAFKTALENFSRALEQME


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH