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Report for CCDS35131.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35131.1 Public Homo sapiens 9 OR5C1 24 110 108 CCDS HistoryNCBI Gene:392391Re-query CCDS DB by CCDS ID:35131.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35131.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373680.3 ENSP00000362784.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373680.3Link to Ensembl Protein Viewer:ENSP00000362784.2Re-query CCDS DB by Nucleotide ID:ENST00000373680Re-query CCDS DB by Protein ID:ENSP00000362784
Original member Current member NCBI NM_001001923.1 NP_001001923.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001923.1Link to Protein Sequence:NP_001001923.1Re-query CCDS DB by Nucleotide ID:NM_001001923Re-query CCDS DB by Protein ID:NP_001001923Link to BLAST:NP_001001923.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001923.1 320 Q8NGR4 320 100% 0 0

Chromosomal Locations for CCDS 35131.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 122788933 122789895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (963 nt):
ATGAACTCAGAGAACCTCACCCGGGCCGCGGTTGCCCCTGCTGAATTCGTCCTCCTGGGCATCACAAATC
GCTGGGACCTGCGTGTGGCCCTCTTCCTGACCTGCCTGCCTGTCTACCTGGTGAGCCTGCTGGGAAACAT
GGGCATGGCGCTGCTGATCCGCATGGATGCCCGGCTCCACACACCTATGTACTTCTTCCTGGCCAACCTC
TCCCTGCTGGATGCCTGCTATTCCTCCGCCATCGGCCCCAAGATGCTAGTGGACCTGCTGCTGCCCCGAG
CCACCATCCCTTACACAGCCTGTGCCCTCCAGATGTTTGTCTTTGCAGGTCTGGCTGATACTGAGTGTTG
CTTGCTGGCAGCCATGGCCTATGACCGCTACGTGGCCATCAGAAACCCACTTCTCTATACAACAGCTATG
TCGCAGCGTCTATGCCTGGCCTTGCTGGGAGCATCAGGCCTGGGTGGGGCAGTGAGTGCCTTTGTTCACA
CAACCCTCACCTTCCGCCTGAGCTTCTGCCGCTCCCGGAAGATCAATAGCTTCTTCTGCGATATCCCTCC
ACTGCTGGCCATCTCGTGCAGTGACACCAGTCTCAATGAACTCCTTCTCTTCGCCATCTGTGGCTTCATC
CAGACAGCCACGGTGTTAGCTATCACGGTGTCTTATGGCTTCATCGCTGGGGCTGTGATCCACATGCGCT
CGGTCGAGGGCAGTCGGCGAGCAGCCTCCACCGGTGGTTCCCACCTCACAGCCGTGGCCATGATGTACGG
GACACTCATTTTCATGTACCTGCGCCCCAGCTCCAGCTATGCCCTGGACACTGACAAGATGGCCTCTGTG
TTCTATACCCTGGTCATCCCGTCTCTCAACCCACTCATCTACAGCCTCCGCAATAAGGAGGTCAAGGAGG
CCCTCAGGCAGACCTGGAGCCGATTCCACTGTCCAGGGCAGGGGTCCCAGTGA

Translation (320 aa):
MNSENLTRAAVAPAEFVLLGITNRWDLRVALFLTCLPVYLVSLLGNMGMALLIRMDARLHTPMYFFLANL
SLLDACYSSAIGPKMLVDLLLPRATIPYTACALQMFVFAGLADTECCLLAAMAYDRYVAIRNPLLYTTAM
SQRLCLALLGASGLGGAVSAFVHTTLTFRLSFCRSRKINSFFCDIPPLLAISCSDTSLNELLLFAICGFI
QTATVLAITVSYGFIAGAVIHMRSVEGSRRAASTGGSHLTAVAMMYGTLIFMYLRPSSSYALDTDKMASV
FYTLVIPSLNPLIYSLRNKEVKEALRQTWSRFHCPGQGSQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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