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Report for CCDS42543.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42543.1 Public Homo sapiens 19 NUDT19 24 110 108 CCDS HistoryNCBI Gene:390916Re-query CCDS DB by CCDS ID:42543.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42543.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397061.4 ENSP00000380251.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397061.4Link to Ensembl Protein Viewer:ENSP00000380251.2Re-query CCDS DB by Nucleotide ID:ENST00000397061Re-query CCDS DB by Protein ID:ENSP00000380251
Original member Current member NCBI NM_001105570.2 NP_001099040.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001105570.2Link to Protein Sequence:NP_001099040.1Re-query CCDS DB by Nucleotide ID:NM_001105570Re-query CCDS DB by Protein ID:NP_001099040Link to BLAST:NP_001099040.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001099040.1 375 A8MXV4 375 100% 0 0

Chromosomal Locations for CCDS 42543.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 32691961 32692674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32709185 32709392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32711752 32711957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1128 nt):
ATGAGCAGCTCCCTGCGGCCGGGCCCCAGCCGCTGGCGGCGGGCGGCCAGCATCGTCCTGGCGGCTGGCT
GGTCGCGCCCGGAGACCGCCACCCCGCCGTCGCGCCCGCCGCCGGCCGAGGGCTTCCGGCTGCTGCTGCT
GCAGCGCTCCCCGCACCAAGGCTTCATGCCGGGCGCGCACGTCTTCTCCGGCGGAGTGCTGGATGCGGCC
GACCGCTCGGCGGACTGGCTGGGCCTCTTCGCGCCGCACCACGGGCCGCCGCGCTTCGGCCTGGGCCCGG
CGCCATTCAGCCGCACCGCTTTCCCGTCGCTGCCCGACACCGATGACCACAAGACCGACAACACTGGGAC
GCTGCCTGAGGACGTAGCCTTCCGCATCTGCGCCGTGCGGGAGGCCTTTGAGGAGGCGGGCGTGCTGCTG
CTGCGGCCCAGGACTTCCCCACCAGGCCCAGCACCCGGGCCTGGCCTCGCCCTGGAGCCACCGCCGGGCC
TGGCCTCCTGGCGCGACCGCGTGCGCCAGGACCCGCGCCACTTCCTGCGGCTGTGCGCCCACCTCGACTG
CACACCCGACATCTGGGCGCTGCACAACTGGAGCGCCTGGCTCACCCCTTTCTTGCGGGGCACCACTCGC
CGCTTTGACACGGCCTTCTTCCTGTGCTGCCTGCGCGAGCCGCCGCCCGTCTACCCCGACTTGGCGGAGG
TGGTGGGCTACCAGTGGTCATCTCCATCAGAGGCAACTGAAAGTTTCTTATCAAAAGAAATTTGGTTGCC
ACCCCCACAGTTCTACGAAGTGAGAAGACTTGCAAACTTTGCCTCTCTCTCTGACTTGCACAAATTTTGT
TTGGGTCGTGCATTAGAAGGACTGGAAAGGTGGCTGCCGATCATCTTGTTAACTGCTGATGGGATGGTCC
ATCTTTTACCAGGTGATGAGCTATATTTAGAAGATTCAGACTTTTTGGAAAATCTTATGTCTACTGAAAA
AAAGACTGAGGAAATCATGAAGGAAGGCAAGCAGTTTCACCGGATAGTGACATACCATCGCCACCTTTAT
GATATCCACGTGACTGTTCAGCCAAAGTATAAACACGTTTATCCTAAGAACTCTGTAGTAAGAAAAAGCC
ATTTGTAG

Translation (375 aa):
MSSSLRPGPSRWRRAASIVLAAGWSRPETATPPSRPPPAEGFRLLLLQRSPHQGFMPGAHVFSGGVLDAA
DRSADWLGLFAPHHGPPRFGLGPAPFSRTAFPSLPDTDDHKTDNTGTLPEDVAFRICAVREAFEEAGVLL
LRPRTSPPGPAPGPGLALEPPPGLASWRDRVRQDPRHFLRLCAHLDCTPDIWALHNWSAWLTPFLRGTTR
RFDTAFFLCCLREPPPVYPDLAEVVGYQWSSPSEATESFLSKEIWLPPPQFYEVRRLANFASLSDLHKFC
LGRALEGLERWLPIILLTADGMVHLLPGDELYLEDSDFLENLMSTEKKTEEIMKEGKQFHRIVTYHRHLY
DIHVTVQPKYKHVYPKNSVVRKSHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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