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Report for CCDS31785.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31785.1 Public Homo sapiens 12 CCDC184 24 110 108 CCDS HistoryNCBI Gene:387856Re-query CCDS DB by CCDS ID:31785.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31785.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316554.5 ENSP00000320849.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000316554.5Link to Ensembl Protein Viewer:ENSP00000320849.3Re-query CCDS DB by Nucleotide ID:ENST00000316554Re-query CCDS DB by Protein ID:ENSP00000320849
Original member Current member NCBI NM_001013635.4 NP_001013657.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013635.4Link to Protein Sequence:NP_001013657.3Re-query CCDS DB by Nucleotide ID:NM_001013635Re-query CCDS DB by Protein ID:NP_001013657Link to BLAST:NP_001013657.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013657.3 194 Q52MB2 194 100% 0 0

Chromosomal Locations for CCDS 31785.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 48184123 48184707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (585 nt):
ATGGAGGACGGTCTGCTGGAGATCATGACCAAGGACGGCGGCGACATGCCGGCGCCCCTGGAGGTGTCCA
CCGTGCCGGCAGTGGGGGACGTGATCTCCGGGGAGTACAACGGCGGCATGAAGGAACTGATGGAGCACCT
GAAAGCCCAGCTGCAAGCCCTGTTTGAGGACGTGAGGGCCATGAGGGGGGCCCTGGACGAGCAGGCCTCG
CACATCCAGGTGCTCTCGGACGACGTGTGCGCCAACCAGCGAGCCATCGTCTCCATGTGCCAGATTATGA
CCACTGCGCCCCGCCAGGGCGGCTTGGGCGTGGTCGGCGGCAAGGGGAGCTTCCAGAGCGACCCCCAAGA
GCCGGAGACTCCTTCGCCTGGGATCGGGGACAGCGGCTTGCTGGGTCGCGATCCCGAGGACGAGGAGGAA
GAGGAAGAAGAGAAGGAGATGCCCAGCCCCGCCACACCCTCCAGTCACTGTGAGCGCCCCGAAAGCCCCT
GTGCTGGTCTCCTTGGGGGGGACGGGCCACTTGTGGAGCCCCTCGACATGCCCGACATTACCCTGCTGCA
ACTGGAGGGCGAGGCCTCCCTGTGA

Translation (194 aa):
MEDGLLEIMTKDGGDMPAPLEVSTVPAVGDVISGEYNGGMKELMEHLKAQLQALFEDVRAMRGALDEQAS
HIQVLSDDVCANQRAIVSMCQIMTTAPRQGGLGVVGGKGSFQSDPQEPETPSPGIGDSGLLGRDPEDEEE
EEEEKEMPSPATPSSHCERPESPCAGLLGGDGPLVEPLDMPDITLLQLEGEASL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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