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Report for CCDS91615.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91615.1 Public Homo sapiens 11 OR8G3P 24 110 108 CCDS HistoryNCBI Gene:387815Re-query CCDS DB by CCDS ID:91615.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Polymorphic pseudogene

Sequence IDs included in CCDS 91615.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641572.1 ENSP00000501928.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641572.1Link to Ensembl Protein Viewer:ENSP00000501928.1Re-query CCDS DB by Nucleotide ID:ENST00000641572Re-query CCDS DB by Protein ID:ENSP00000501928
Original member Current member EBI ENST00000641848.1 ENSP00000502462.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641848.1Link to Ensembl Protein Viewer:ENSP00000502462.1Re-query CCDS DB by Nucleotide ID:ENST00000641848Re-query CCDS DB by Protein ID:ENSP00000502462
Original member Current member NCBI NM_001395906.1 NP_001382835.1 Accepted alive Link to Nucleotide Sequence:NM_001395906.1Link to Protein Sequence:NP_001382835.1Re-query CCDS DB by Nucleotide ID:NM_001395906Re-query CCDS DB by Protein ID:NP_001382835Link to BLAST:NP_001382835.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001382835.1 310 P0DMU2 310 99.6774% 0 1

Chromosomal Locations for CCDS 91615.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 124214755 124215687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. This works on the replacement symbol in the Translation Exceptions section also.

Translation Exceptions:
replace the symbol V (codon GTG) with M at amino acid position 1

Nucleotide Sequence (933 nt):
GTGGACCCTGGAAACCATTCCTCAGTGACTGAGTCCATTCTGGCTGGGCTCTCAGAACAGCCAGAGCTCC
AGCTGCGCCTCTTCCTCCTGTTCTTAGGAATCTGTGTGGTCACAGTGGTGGGCAACTTGGGCATGATCAC
ACTGATTGGGCTCAGTTCTCACCTGCACACACCTATGTACTATTTCCTCAGCAGTCTGTCCTTCATTGAC
TTCTGCCATTCCACTGTCATTACCCCTAAGATGCTGGTGAACTTTGCGACAGAGAAGAACATCATCTCCT
ACCCTGAATGCATGGCTCAGCTCTATTTATTCAGTATTTTTGCTATTGCAGAGTGTCACATGTTGGCTGC
AATGGCGTATGACTGTTATGTTGCCATCTGCAGCCCCTTGCTGTACAATGTCATCATGTCCTATCACCAC
TGCTTCTGGCTCACAGTGGGAGTTTACATTTTAGGCATCCTTGGATCTACAATTCATACCAGTTTTATGT
TGAGACTCTTTTTGTGCAAGACTAATGTGATTAACCATTATTTTTGTGATCTTTTCCCTCTCTTGGGGCT
CTCCTGCTCCAGCACCTACATCAATGAATTACTGGTTCTGGTCTTGAGTGCATTTAACATCCTGATGCCT
GCCTTAACCATCCTTGCTTCTTACATCTTTATCATTGCCAGCATCCTCCGCATTCACTCCACTGAGGGCA
GGTCCAAAGCCTTTAGCACTTGCAGCTCCCACATCTTGGCTGTTGCTGTTTTCTTTGGATCTGCAGCATT
CATGTACCTGCAGCCATCATCTGTCAGCTCCATGGACCAGAGGAAAGTGTCGTCTGTGTTTTATACTACT
ATTGTGCCCATGCTGAACCCCCTGATCTACAGCCTGAGGAATAAAGATGTCAAACTTGCCGTGAAGAAAA
TTCTGCATCAGACAGCATGTTAA

Translation (310 aa):
MDPGNHSSVTESILAGLSEQPELQLRLFLLFLGICVVTVVGNLGMITLIGLSSHLHTPMYYFLSSLSFID
FCHSTVITPKMLVNFATEKNIISYPECMAQLYLFSIFAIAECHMLAAMAYDCYVAICSPLLYNVIMSYHR
CFWLTVGVYILGILGSTIHTSFMLRLFLCKTNVINHYFCDLFPLLGLSCSSTYINELLVLVLSAFNILMP
ALTILASYIFIIASILRIHSTEGRSKAFSTCSSHILAVAVFFGSAAFMYLQPSSVSSMDQRKVSSVFYTT
IVPMLNPLIYSLRNKDVKLAVKKILHQTAC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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