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Report for CCDS7694.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7694.1 Public Homo sapiens 11 B4GALNT4 24 110 108 CCDS HistoryNCBI Gene:338707Re-query CCDS DB by CCDS ID:7694.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7694.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329962.11 ENSP00000328277.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329962.11Link to Ensembl Protein Viewer:ENSP00000328277.6Re-query CCDS DB by Nucleotide ID:ENST00000329962Re-query CCDS DB by Protein ID:ENSP00000328277
Original member Current member NCBI NM_178537.5 NP_848632.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178537.5Link to Protein Sequence:NP_848632.2Re-query CCDS DB by Nucleotide ID:NM_178537Re-query CCDS DB by Protein ID:NP_848632Link to BLAST:NP_848632.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848632.2 1039 Q76KP1 1039 100% 0 0

Chromosomal Locations for CCDS 7694.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 369804 369954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 372109 372212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 372662 372754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 372852 372947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 373026 373116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 373191 373291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 373449 373516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 373750 373828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 375461 375527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 375639 375773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 375847 375956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 376074 376174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 376251 376351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 376421 377327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 379418 379701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 379866 380019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 380130 380202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 380292 380445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 380825 380951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 381669 381792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3120 nt):
ATGCCGCGGCTCCCGGTGAAGAAGATCCGTAAGCAGATGAAGCTGCTGCTGCTGCTGCTGCTGCTGAGCT
GCGCCGCGTGGCTCACCTACGTGCACCTGGGCCTGGTGCGCCAGGGACGCGCGCTGCGCCAGCGCCTGGG
CTACGGGCGAGATGGTGAGAAGCTGACCAGTGAGACCGACGGCCGGGGGGTCCACGCTGCGCCATCCACA
CAGAGGGCTGAGGACTCCAGTGAGAGCCGTGAAGAGGAGCAAGCGCCCGAAGGTCGGGACCTAGACATGC
TGTTTCCTGGGGGGGCTGGGAGGCTGCCACTGAACTTCACCCATCAGACACCCCCATGGCGGGAGGAGTA
CAAGGGGCAGGTGAACCTGCACGTGTTTGAGGACTGGTGTGGGGGCGCCGTGGGCCACCTGAGGAGGAAC
CTGCACTTCCCGCTGTTCCCTCATACGCGCACCACCGTGAAGAAGTTGGCCGTGTCCCCCAAGTGGAAGA
ACTATGGACTCCGTATTTTTGGTTTCATCCACCCGGCGAGGGACGGAGACGTCCAGTTTTCTGTGGCCTC
AGACGACAACTCGGAGTTCTGGCTGAGTCTGGACGAGAGCCCTGCTGCTGCCCAGCTTGTGGCCTTTGTG
GGCAAGACTGGCTCCGAGTGGACAGCGCCTGGAGAATTCACCAAGTTCAGCTCCCAGGTGTCCAAGCCCA
GGCGGCTCATGGCCTCCCGGAGGTACTACTTTGAGTTGCTGCACAAGCAGGACGACCGCGGCTCGGACCA
CGTGGAAGTGGGCTGGCGAGCTTTCCTGCCCGGCCTGAAGTTCGAGGTCATCAGCTCTGCTCACATCTCC
CTGTACACAGATGAGTCAGCCTTGAAGATGGACCACGTGGCGCACGTCCCCCAGTCTCCAGCCAGCCACG
TGGGGGGGCGTCCGCCGCAGGAGGAGACCAGCGCAGACATGCTGCGGCCAGATCCCAGGGATACCTTTTT
CCTCACTCCACGCATGGAATCTTCGAGCCTGGAGAACGTGCTGGAGCCCTGCGCCTACGCCCCCACCTAC
GTGGTCAAGGACTTCCCGATCGCCAGATACCAGGGCCTGCAATTTGTGTACCTGTCCTTCGTTTATCCCA
ACGACTACACTCGCCTCACCCACATGGAGACGGACAACAAGTGCTTCTACCGCGAGTCTCCGCTGTATCT
GGAGAGGTTTGGGTTCTATAAATACATGAAGATGGACAAGGAGGAGGGGGATGAGGATGAAGAAGACGAG
GTGCAGCGCCGAGCCTTCCTCTTCCTCAACCCGGACGACTTCCTGGACGACGAGGACGAGGGGGAGCTGC
TCGACAGCCTGGAGCCCACCGAGGCGGCCCCGCCCAGGAGCGGCCCCCAGTCCCCCGCCCCAGCAGCCCC
CGCCCAGCCCGGAGCCACCCTCGCCCCGCCGACCCCTCCCCGCCCCCGGGACGGGGGGACCCCCAGGCAC
TCCCGGGCCCTGAGCTGGGCCGCCAGGGCCGCCCGCCCTTTGCCGCTCTTCTTGGGCCGAGCTCCGCCCC
CGCGCCCTGCAGTGGAGCAGCCGCCCCCAAAGGTGTACGTGACCAGGGTGCGGCCGGGACAGCGGGCATC
CCCCCGGGCCCCAGCGCCGCGTGCGCCCTGGCCGCCCTTCCCTGGCGTCTTCCTGCACCCCAGGCCTCTG
CCCAGAGTGCAGCTGCGGGCGCCCCCACGCCCACCCCGGCCCCACGGCCGCAGGACCGGCGGCCCCCAGG
CCACACAGCCGAGGCCCCCAGCCCGGGCGCAGGCCACCCAAGGGGGCCGGGAGGGCCAGGCGCGCACGCT
GGGACCTGCGGCGCCCACAGTGGACTCAAACTTGTCCTCCGAAGCGCGGCCCGTGACCTCCTTCCTGAGC
TTGTCCCAGGTGTCCGGGCCGCAGCTGCCCGGGGAGGGCGAAGAGGAGGAGGAAGGGGAGGACGATGGGG
CCCCGGGCGACGAGGCCGCGTCGGAGGACAGCGAGGAGGCCGCGGGCCCGGCGCTCGGACGCTGGCGTGA
GGACGCCATCGACTGGCAGCGCACGTTCAGCGTGGGCGCCGTGGACTTCGAGCTGCTGCGCTCGGACTGG
AACGACCTGCGATGCAACGTTTCGGGGAACCTGCAGCTGCCGGAGGCGGAGGCCGTGGACGTGACCGCTC
AGTACATGGAGCGGCTGAACGCGCGCCACGGCGGGCGCTTCGCGCTTCTGCGCATCGTGAACGTGGAGAA
GCGCCGGGACTCGGCGCGAGGGAGTCGCTTCCTGCTGGAGCTGGAGCTGCAGGAGCGCGGGGGCGGCCGC
CTGCGACTGTCCGAGTACGTCTTCCTGCGGCTGCCGGGAGCCCGCGTAGGGGATGCAGACGGAGAAAGTC
CCGAACCCGCTCCCGCCGCCTCCGTGCGCCCCGACGGCCGCCCCGAGCTCTGCCGGCCACTGCGCCTGGC
CTGGCGCCAGGACGTGATGGTTCACTTCATCGTGCCAGTGAAAAACCAGGCACGGTGGGTGGCACAGTTC
CTGGCGGACATGGCTGCGCTGCACGCGCGCACCGGGGACTCGCGTTTCAGCGTCGTCCTGGTGGATTTCG
AGAGCGAGGATATGGACGTGGAGCGGGCCCTGCGCGCCGCGCGCCTGCCCCGGTACCAGTACCTGAGACG
AACCGGGAACTTCGAGCGCTCCGCCGGGCTGCAGGCGGGAGTGGACGCGGTAGAGGACGCCAGCAGCATC
GTGTTCCTCTGCGACCTGCACATCCACTTCCCACCCAACATCCTGGACGGCATCCGCAAGCACTGCGTGG
AGGGCAGGCTGGCCTTCGCGCCCGTGGTCATGCGCCTGAGCTGCGGGAGCTCGCCCCGGGACCCCCACGG
TTACTGGGAGGTGAACGGCTTTGGCCTTTTTGGGATCTACAAGTCGGACTTTGACCGGGTTGGAGGAATG
AACACGGAGGAGTTCCGAGACCAGTGGGGGGGTGAAGACTGGGAGCTCCTGGACAGGGTCCTGCAGGCAG
GGCTGGAGGTGGAGCGGCTCCGACTGCGGAATTTCTATCACCACTACCACTCCAAGAGGGGCATGTGGAG
CGTCCGCAGCAGGAAGGGCTCTCGCACGGGGGCGTCTTGA

Translation (1039 aa):
MPRLPVKKIRKQMKLLLLLLLLSCAAWLTYVHLGLVRQGRALRQRLGYGRDGEKLTSETDGRGVHAAPST
QRAEDSSESREEEQAPEGRDLDMLFPGGAGRLPLNFTHQTPPWREEYKGQVNLHVFEDWCGGAVGHLRRN
LHFPLFPHTRTTVKKLAVSPKWKNYGLRIFGFIHPARDGDVQFSVASDDNSEFWLSLDESPAAAQLVAFV
GKTGSEWTAPGEFTKFSSQVSKPRRLMASRRYYFELLHKQDDRGSDHVEVGWRAFLPGLKFEVISSAHIS
LYTDESALKMDHVAHVPQSPASHVGGRPPQEETSADMLRPDPRDTFFLTPRMESSSLENVLEPCAYAPTY
VVKDFPIARYQGLQFVYLSFVYPNDYTRLTHMETDNKCFYRESPLYLERFGFYKYMKMDKEEGDEDEEDE
VQRRAFLFLNPDDFLDDEDEGELLDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRH
SRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPL
PRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPVTSFLS
LSQVSGPQLPGEGEEEEEGEDDGAPGDEAASEDSEEAAGPALGRWREDAIDWQRTFSVGAVDFELLRSDW
NDLRCNVSGNLQLPEAEAVDVTAQYMERLNARHGGRFALLRIVNVEKRRDSARGSRFLLELELQERGGGR
LRLSEYVFLRLPGARVGDADGESPEPAPAASVRPDGRPELCRPLRLAWRQDVMVHFIVPVKNQARWVAQF
LADMAALHARTGDSRFSVVLVDFESEDMDVERALRAARLPRYQYLRRTGNFERSAGLQAGVDAVEDASSI
VFLCDLHIHFPPNILDGIRKHCVEGRLAFAPVVMRLSCGSSPRDPHGYWEVNGFGLFGIYKSDFDRVGGM
NTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYHSKRGMWSVRSRKGSRTGAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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