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Report for CCDS31495.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31495.1 Public Homo sapiens 11 OR4C13 24 110 108 CCDS HistoryNCBI Gene:283092Re-query CCDS DB by CCDS ID:31495.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31495.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000555099.1 ENSP00000452277.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000555099.1Link to Ensembl Protein Viewer:ENSP00000452277.1Re-query CCDS DB by Nucleotide ID:ENST00000555099Re-query CCDS DB by Protein ID:ENSP00000452277
Original member Current member NCBI NM_001001955.2 NP_001001955.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001955.2Link to Protein Sequence:NP_001001955.2Re-query CCDS DB by Nucleotide ID:NM_001001955Re-query CCDS DB by Protein ID:NP_001001955Link to BLAST:NP_001001955.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001955.2 309 Q8NGP0 309 100% 0 0

Chromosomal Locations for CCDS 31495.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 49952423 49953352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGCGAATAGAAACAATGTGACAGAGTTTATTCTATTGGGGCTTACAGAGAATCCAAAAATGCAGAAAA
TC
ATATTTGTTGTGTTTTCTGTCATCTACATCAACGCCATGATAGGAAATGTGCTCATTGTGGTCACCAT
C
ACTGCCAGCCCATCACTGAGATCCCCCATGTACTTTTTCCTGGCCTATCTCTCCTTTATTGATGCCTGC
TAT
TCCTCTGTCAATACCCCTAAGCTGATCACAGATTCACTCTATGAAAACAAGACTATCTTATTCAATG
GA
TGTATGACTCAAGTCTTTGGAGAACATTTTTTCAGAGGTGTTGAGGTCATCCTACTTACTGTAATGGC
C
TATGACCACTATGTGGCCATCTGCAAGCCCTTGCACTATACCACCGTCATGAAGCAGCATGTTTGTAGC
CTG
CTAGTGGGAGTGTCATGGGTAGGAGGCTTTCTTCATGCAACCATACAGATCCTCTTCATCTGTCAAT
TA
CCTTTCTGTGGTCCTAATGTCATAGATCACTTTATGTGTGATCTCTACACTTTGATCAATCTTGCCTG
C
ACTAATACCCACACTCTAGGACTCTTCATTGCTGCCAACAGTGGGTTCATATGCCTGTTAAACTGTCTC
TTG
CTCCTGGTCTCCTGCGTGGTCATACTGTACTCCTTAAAGACCCACAGCTTAGAGGCAAGGCACGAAG
CC
CTCTCTACCTGTGTCTCCCACATCACAGTTGTCATCTTATCCTTTATACCCTGCATATTTGTGTACAT
G
AGACCTCCAGCTACTTTACCCATTGATAAAGCAGTTGCTGTATTCTACACTATGATAACTTCTATGTTA
AAC
CCCTTAATCTACACCTTGAGGAATGCTCAAATGAAAAATGCCATTAGGAAATTGTGTAGTAGGAAAG
CT
ATTTCAAGTGTCAAATAA


Translation (309 aa):
MANRNNVTEFILLGLTENPKMQKIIFVVFSVIYINAMIGNVLIVVTITASPSLRSPMYFFLAYLSFIDAC
Y
SSVNTPKLITDSLYENKTILFNGCMTQVFGEHFFRGVEVILLTVMAYDHYVAICKPLHYTTVMKQHVCS
L
LVGVSWVGGFLHATIQILFICQLPFCGPNVIDHFMCDLYTLINLACTNTHTLGLFIAANSGFICLLNCL
L
LLVSCVVILYSLKTHSLEARHEALSTCVSHITVVILSFIPCIFVYMRPPATLPIDKAVAVFYTMITSML
N
PLIYTLRNAQMKNAIRKLCSRKAISSVK




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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