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Report for CCDS401.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
401.1 Public Homo sapiens 1 TEKT2 24 110 108 CCDS HistoryNCBI Gene:27285Re-query CCDS DB by CCDS ID:401.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 401.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000207457.8 ENSP00000207457.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000207457.8Link to Ensembl Protein Viewer:ENSP00000207457.3Re-query CCDS DB by Nucleotide ID:ENST00000207457Re-query CCDS DB by Protein ID:ENSP00000207457
Original member Current member NCBI NM_014466.3 NP_055281.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014466.3Link to Protein Sequence:NP_055281.2Re-query CCDS DB by Nucleotide ID:NM_014466Re-query CCDS DB by Protein ID:NP_055281Link to BLAST:NP_055281.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055281.2 430 Q9UIF3 430 100% 0 0

Chromosomal Locations for CCDS 401.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 36084922 36085077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36085163 36085288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36085836 36086041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36086704 36086847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36086931 36087045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36087204 36087311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36087439 36087582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36087728 36087807 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36087973 36088186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1293 nt):
ATGGCCACGCTGAGCGTCAAGCCAAGTCGGCGCTTCCAGCTGCCCGACTGGCACACTAACAGCTACCTGC
TATCCACCAATGCCCAGCTGCAGCGAGATGCTTCCCATCAGATCCGCCAGGAGGCCCGGGTGCTCCGCAA
CGAGACCAACAACCAGACCATTTGGGATGAACATGACAACAGGACTCGACTGGTGGAGAGGATTGATACT
GTCAACCGGTGGAAGGAGATGCTGGACAAGTGTCTGACAGATTTAGATGCCGAGATCGATGCCCTGACAC
AGATGAAGGAGTCAGCAGAGCAAAACCTGCAGGCCAAGAACCTGCCTCTGGATGTGGCCATTGAGTGCCT
GACCCTGCGGGAAAGCCGGCGAGACATTGATGTGGTGAAGGACCCTGTGGAGGATGAGCTGCATAAAGAG
GTGGAGGTCATCGAGGCCACCAAGAAGGCCTTGCAACAGAAGGTCAGCCAGGCCTTCGAGCAGCTCTGCC
TCTTGCAGGAAGTCCAACAGCAGCTCAACTCCGACCATCGGGGCAAAATGGAGACACTAGAGATCGACAG
AGGCTGTCTCTCTCTCAACCTCAGATCCCCAAACATCTCGCTGAAGGTTGACCCCACACGTGTACCTGAT
GGCTCCACCACACTCCAGCAGTGGGATGACTTCAGTCGGTTCAACAAGGACCGAGCGGAGGCTGAGATGA
AGGCAGCCACAGAGCTGAGGGAGGCCACTGCTCTAACTATTGCTGAGACCAACAACGAGCTTGAAGCCCA
GAGAGTTGCAACGGAATTTGCCTTCAGGAAGCGGCTGCGGGAGATGGAGAAAGTGTACAGTGAGCTCAAG
TGGCAAGAGAAGAATACCTTGGAGGAGATCGCTGAGCTGCAGGAGGACATCCGGCACCTGGAGGAGGATC
TGCGCACAAAGCTCCTGAGCCTGAAGCTGTCCCATACCCGGCTAGAGGCCAGAACCTACCGGCCCAACGT
GGAACTCTGCCGGGACCAGGCACAGTACGGCCTCACCGACGAGGTTCACCAGCTAGAGGCAACCATCGCT
GCCCTGAAGCAGAAGCTGGCGCAAGCACAGGACGCACTGGACGCCCTGTGCAAGCACCTGGCCCGGCTGC
AGGCTGACATTGCCTGCAAGGCCAACTCCATGCTGCTGGACACCAAGTGCATGGACACACGGCGCAAGCT
GACCGTGCCTGCTGAGAGGTTCGTGCCTGAGGTGGACACCTTCACACGTACCACAAATAGCACCCTGAGT
CCACTCAAAAGCTGCCAGCTGGAGCTGGCCTAG

Translation (430 aa):
MATLSVKPSRRFQLPDWHTNSYLLSTNAQLQRDASHQIRQEARVLRNETNNQTIWDEHDNRTRLVERIDT
VNRWKEMLDKCLTDLDAEIDALTQMKESAEQNLQAKNLPLDVAIECLTLRESRRDIDVVKDPVEDELHKE
VEVIEATKKALQQKVSQAFEQLCLLQEVQQQLNSDHRGKMETLEIDRGCLSLNLRSPNISLKVDPTRVPD
GSTTLQQWDDFSRFNKDRAEAEMKAATELREATALTIAETNNELEAQRVATEFAFRKRLREMEKVYSELK
WQEKNTLEEIAELQEDIRHLEEDLRTKLLSLKLSHTRLEARTYRPNVELCRDQAQYGLTDEVHQLEATIA
ALKQKLAQAQDALDALCKHLARLQADIACKANSMLLDTKCMDTRRKLTVPAERFVPEVDTFTRTTNSTLS
PLKSCQLELA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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