CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS15983.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
15983.1 |
Public |
Mus musculus |
2 |
Or1j4 |
23 |
108 |
98 |
|
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 15983.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000055130.2 |
ENSMUSP00000053105.2 |
Accepted |
alive |
|
|
|
EBI |
ENSMUST00000215100.1 |
ENSMUSP00000149667.1 |
Accepted |
alive |
|
|
|
EBI |
ENSMUST00000214457.1 |
ENSMUSP00000150158.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_146627.1 |
NP_666838.1 |
Accepted |
alive |
|
Chromosomal Locations for CCDS 15983.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (939 nt): ATGAAAAGGGATAACCAGAGTATGGTGTCTGAATTCATCCTCCTGGGGCTCCCCATCCGGCCAGAGGAGC AAGGCATGTACTATGCCCTGTTCTTGACCATGTACCTGACAACTGTGCTGGGGAACCTGCTCATCATCCT ACTCATCAGGCTGGACTCTCACCTCCACACCCCCATGTACTTCTTCCTCAGCCACTTGGCCTTCACAGAC ATCTCTTTCTCATCTGTCACTGTACCCAAGATGCTGAGGAATATGCATATTCATGATCCATCCATTCCTT ATGCAGAGTGTATAGCACAGATGTATTTTTTCATATTATTCACTGATCTGGACAACTTTCTCCTCACTTC AATGGCATATGATCGGTATGTGGCCATCTGTCATCCCCTGCACTACACCACCATCATGAGAGAGGAGCTC TGTATCTTACTCGTAGCTATATCCTGGATCCTATCCTGTGTCAGTGCCCTGTCTCACACCCTCCTCCTGG CCCGGCTATCCTTCTGTGCTGACAACACCATTTCTCATTTCTTCTGTGACCTTGCTGCCTTGCTGAAGCT CTCATGCTCAGACATCTCCCTCAATGAACTGGTCATTTTTACAGTAGGTACAACAGTCATTACTCTGCCA TTAATATGTATCTTGATCTCTTATGGTCACATTGTGGCCACCATTCTGAAAGTTTCATCTAACAAAGGGA TCTGCAAAGCATTGTCCACATGTGGCTCCCACCTCTCTGTGGTGTCTCTGTATTATGGTACAATTATTGG AGTTTATTTTATACCTTCATCCTTTACTTCTACTGACAAGGGCATAGTTGCTTCTGTGATGTACACAGTG GTCACTCCATTGCTGAACCCCTTCATTTATAGCATACGGAACAGAGACATGAAGGAGGCTTTGAAAAAGC TCTTCAACAGAGCATCAATCTCAACTTAA
Translation (312 aa): MKRDNQSMVSEFILLGLPIRPEEQGMYYALFLTMYLTTVLGNLLIILLIRLDSHLHTPMYFFLSHLAFTD ISFSSVTVPKMLRNMHIHDPSIPYAECIAQMYFFILFTDLDNFLLTSMAYDRYVAICHPLHYTTIMREEL CILLVAISWILSCVSALSHTLLLARLSFCADNTISHFFCDLAALLKLSCSDISLNELVIFTVGTTVITLP LICILISYGHIVATILKVSSNKGICKALSTCGSHLSVVSLYYGTIIGVYFIPSSFTSTDKGIVASVMYTV VTPLLNPFIYSIRNRDMKEALKKLFNRASIST
|