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Report for CCDS30921.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30921.1 Public Homo sapiens 1 CFAP126 24 110 108 CCDS HistoryNCBI Gene:257177Re-query CCDS DB by CCDS ID:30921.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30921.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367974.2 ENSP00000356951.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367974.2Link to Ensembl Protein Viewer:ENSP00000356951.1Re-query CCDS DB by Nucleotide ID:ENST00000367974Re-query CCDS DB by Protein ID:ENSP00000356951
Original member Current member NCBI NM_001013625.4 NP_001013647.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013625.4Link to Protein Sequence:NP_001013647.2Re-query CCDS DB by Nucleotide ID:NM_001013625Re-query CCDS DB by Protein ID:NP_001013647Link to BLAST:NP_001013647.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013647.2 177 Q5VTH2 177 100% 0 0

Chromosomal Locations for CCDS 30921.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 161364965 161365150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161365526 161365702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161366198 161366278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161366439 161366501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161367842 161367868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (534 nt):
ATGGCCACTAACTACAGTGCCAACCAGTATGAAAAGGCTTTCTCATCCAAGTATCTGCAGAACTGGTCTC
CCACTAAGCCAACAAAAGAGAGCATCTCTTCTCATGAAGGCTACACTCAAATTATTGCCAACGATCGTGG
TCATCTACTGCCTTCTGTGCCCCGTTCCAAGGCAAATCCTTGGGGTTCCTTCATGGGCACCTGGCAAATG
CCTCTGAAGATACCCCCTGCTCGGGTGACCCTGACCTCCCGTACAACTGCTGGTGCTGCCTCCCTCACCA
AATGGATACAGAAAAATCCTGATTTACTCAAGGCCTCCAATGGGCTGTGTCCTGAAATCTTAGGCAAGCC
CCATGATCCAGACAGTCAGAAGAAACTCAGAAAGAAGTCTATCACAAAGACTGTACAACAAGCACGAAGT
CCAACCATAATTCCAAGCTCCCCAGCTGCCAACCTCAATTCCCCAGATGAACTCCAAAGCTCACACCCCT
CTGCAGGTCATACTCCAGGTCCCCAAAGACCAGCCAAATCCTAA

Translation (177 aa):
MATNYSANQYEKAFSSKYLQNWSPTKPTKESISSHEGYTQIIANDRGHLLPSVPRSKANPWGSFMGTWQM
PLKIPPARVTLTSRTTAGAASLTKWIQKNPDLLKASNGLCPEILGKPHDPDSQKKLRKKSITKTVQQARS
PTIIPSSPAANLNSPDELQSSHPSAGHTPGPQRPAKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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