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Report for CCDS20732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20732.1 Public Mus musculus 7 Leng9 23 108 98 CCDS HistoryNCBI Gene:243813Re-query CCDS DB by CCDS ID:20732.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20732.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000058358.7 ENSMUSP00000061079.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000058358.7Link to Ensembl Protein Viewer:ENSMUSP00000061079.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000058358Re-query CCDS DB by Protein ID:ENSMUSP00000061079
Original member Current member NCBI NM_175529.3 NP_780738.1 Accepted alive Link to Nucleotide Sequence:NM_175529.3Link to Protein Sequence:NP_780738.1Re-query CCDS DB by Nucleotide ID:NM_175529Re-query CCDS DB by Protein ID:NP_780738Link to BLAST:NP_780738.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780738.1 485 Q8BTN6 485 100% 0 0

Chromosomal Locations for CCDS 20732.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 4148218 4149675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1458 nt):
ATGGAGGCCTCGGCCGATTCCTCTGAGGCCCCCGCGGTCTGCCGCTTCTTCCTAGAGGGCCGCTGTCGCT
TCGGTGCGCGCTGCCGTCAGCCACATCCCGGGGCCCCGGCGCCGTCCCCGGTGGTTACGCAACCGGAGGC
TGGGTCCAAGAAGCCGGCTCTGCGTACTGCTGCTGACGTCATCCGACGCATCCGCTGGGACCCGCGCCTG
GACCCTGCTGACTTTTCGGTGGGCTACACCGACCGCTTCCTGGGAGTGCAGGAAGAGCCATTCTGCGCCT
TCTGCTGGGACGAGCCGCTGGCAGCGCTCGGACCTGGCGTGTTGGCAGTGCCGCAGCACCGCATACGCTA
CTTCCGCTTCCGCGGCCGCCTGGTATGGGACCGTGCCTCCCGTACTGACCTCATTTTTGGATCGGGCTCT
GTGGCTGGTCGGGGACCCACTATCCTTGATGCGCTGGACGGCGGGGACGAGCATTGGACAGAGGTCACGG
CAGAAATTCCCGACACAGAGAAAACAGGGGTGGGTTTAGAGGGTCTGGATACCCAGGATGCCCTTGCAGA
GGCGGGTGGAAACCCGACCGGAACAGGTCTTGATTCGGGCCTGGAGACACACGAAGAGGGTGGGGCAATC
AAAGAGACCAGAACTGGGCTTGATTCCAGCCTGGAGACACCTGAAGTGGATGGGCCAACCAAAGAGACCG
GGCTGAATGGGACCACTGAGTTAGAAATGCCAGACCCAAGCATGAACTTCTCAGGAGTGAAGATCAGCTC
AGTAGAGGAGCCCAGAGCTACATTGCTTCCACAGTGGCAGGCGCAGGGCATGGAAACGAAAGGGCTTTCT
GCTGAAGAGATGGGAAATGTGTGGGATCCAGGTGTTTGGCCTGACGACAGAAGGGCCCCTCGCCAGCCCC
GGCCCACACATTTTGTGGCACTGATGGTGACAGAGTCTGGGCTTAGGGCTGAGGTGGTCAAGGCCCAAGA
GCATCTGGTCCGGATTGCCCCTTCTTGTGCTGAGTTCCTGGTACCAGCACAGGCCCTGCACTTGACAGTG
GTCTTGCTAAGGCTGACAGGCCCTGGGGAGGAGGCTGCAGCAGCTAGAGCTCTTCGGAGAGCCATCTTGA
AACCAGGGCTTCAGGCACCCTCCCAGCTACAGTTCAGGGACTTGGTTCTTCTGGGCCATCATGTGCTCTG
TGCCACACCCTCCCCCACACTGACAGGTATGGCCCAAACACTGAATCAGAGGCTAGAGGCCGAAGGGCTT
AGAGTGGTGCTGCTGCCAGAACTACAACCGCACCTCACCCTGGCTAAGGTACCACATGGAACCCAGGTCT
GCCTCCCTAAGCCTGAGTACACCCTGAACCAGGAGCTAGGAAGGCAGCCCCTAAGTAAACTCTGGCTTTG
CCGCATGGGTAGAGCAGGGCATAGCTATCTTCCCTTGGTAGAAATTTCCCTGAAATGA

Translation (485 aa):
MEASADSSEAPAVCRFFLEGRCRFGARCRQPHPGAPAPSPVVTQPEAGSKKPALRTAADVIRRIRWDPRL
DPADFSVGYTDRFLGVQEEPFCAFCWDEPLAALGPGVLAVPQHRIRYFRFRGRLVWDRASRTDLIFGSGS
VAGRGPTILDALDGGDEHWTEVTAEIPDTEKTGVGLEGLDTQDALAEAGGNPTGTGLDSGLETHEEGGAI
KETRTGLDSSLETPEVDGPTKETGLNGTTELEMPDPSMNFSGVKISSVEEPRATLLPQWQAQGMETKGLS
AEEMGNVWDPGVWPDDRRAPRQPRPTHFVALMVTESGLRAEVVKAQEHLVRIAPSCAEFLVPAQALHLTV
VLLRLTGPGEEAAAARALRRAILKPGLQAPSQLQFRDLVLLGHHVLCATPSPTLTGMAQTLNQRLEAEGL
RVVLLPELQPHLTLAKVPHGTQVCLPKPEYTLNQELGRQPLSKLWLCRMGRAGHSYLPLVEISLK


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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