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Report for CCDS27321.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27321.1 Public Mus musculus 14 Spry2 23 108 98 CCDS HistoryNCBI Gene:24064Re-query CCDS DB by CCDS ID:27321.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27321.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022709.5 ENSMUSP00000022709.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022709.5Link to Ensembl Protein Viewer:ENSMUSP00000022709.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000022709Re-query CCDS DB by Protein ID:ENSMUSP00000022709
Original member NCBI NM_011897.3 NP_036027.1 Updated not alive Link to Nucleotide Sequence:NM_011897.3Link to Protein Sequence:NP_036027.1Re-query CCDS DB by Nucleotide ID:NM_011897Re-query CCDS DB by Protein ID:NP_036027
Current member NCBI NM_011897.4 NP_036027.1 Accepted alive Link to Nucleotide Sequence:NM_011897.4Link to Protein Sequence:NP_036027.1Re-query CCDS DB by Nucleotide ID:NM_011897Re-query CCDS DB by Protein ID:NP_036027Link to BLAST:NP_036027.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036027.1 315 Q9QXV8 315 100% 0 0

Chromosomal Locations for CCDS 27321.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 105892803 105893750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGGAGGCCAGAGCTCAGAGTGGCAACGGGTCGCAGCCTTTGCTGCAGACAGCCCATGACAGTGGCAGGC
AGCGCGGGGAGCCGGATCCAAGAGATGCCCTTACCCAGCAGGTACACGTCTTGTCTCTGGATCAGATCAG
AGCCATCCGAAACACCAATGAGTACACAGAGGGCCCTACTGTGGTCCCAAGACCTGGGCTCAAGCCTGCT
CCTCGCCCCTCCACTCAGCACAAACATGAAAGACTCCACGGTCTGCCGGAGCACCGCCAGCCTCCCAGGC
TCCAGCCCTCGCAGGTCCATTCTTCACGGGCCCCTCTGTCCAGGTCCATCAGCACTGTCAGCTCAGGGTC
TCGGAGCAGTACAAGGACAAGTACCAGCAGCAGCTCCTCGGAACAGAGACTGTTAGGACCGTCCTTCTCC
CACGGGCCTGCTGCTGCTGATGGAATAATCCGAGTGCAGCCTAAATCGGAGCTCAAGCCTGGTGACGTTA
AGCCACTGAGCAAGGATGATTTGGGTCTGCATGCCTACAGGTGTGAGGACTGCGGCAAGTGCAAGTGTAA
GGAGTGCACCTACCCGAGGCCCCTGCCGTCGGACTGGATCTGTGACAAGCAGTGCCTCTGCTCAGCCCAG
AACGTCATTGACTATGGGACTTGTGTGTGCTGTGTGAAAGGTCTCTTCTATCACTGCTCCAATGACGATG
AGGACAATTGTGCTGACAACCCGTGCTCTTGCAGCCAGTCCCATTGTTGTACGCGATGGTCAGCGATGGG
AGTCATGTCTCTCTTTTTGCCTTGTTTATGGTGTTACCTTCCAGCCAAGGGTTGCCTTAAATTGTGCCAG
GGGTGTTATGACCGAGTGAACAGGCCGGGTTGTCGTTGTAAAAACTCAAATACAGTTTGCTGCAAAGTTC
CCACTGTCCCCCCTAGGAACTTTGAAAAGCCGACATAG

Translation (315 aa):
MEARAQSGNGSQPLLQTAHDSGRQRGEPDPRDALTQQVHVLSLDQIRAIRNTNEYTEGPTVVPRPGLKPA
PRPSTQHKHERLHGLPEHRQPPRLQPSQVHSSRAPLSRSISTVSSGSRSSTRTSTSSSSSEQRLLGPSFS
HGPAAADGIIRVQPKSELKPGDVKPLSKDDLGLHAYRCEDCGKCKCKECTYPRPLPSDWICDKQCLCSAQ
NVIDYGTCVCCVKGLFYHCSNDDEDNCADNPCSCSQSHCCTRWSAMGVMSLFLPCLWCYLPAKGCLKLCQ
GCYDRVNRPGCRCKNSNTVCCKVPTVPPRNFEKPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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