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Report for CCDS37559.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37559.1 Public Mus musculus 17 Zfp952 23 108 98 CCDS HistoryNCBI Gene:240067Re-query CCDS DB by CCDS ID:37559.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37559.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087666.10 ENSMUSP00000084949.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087666.10Link to Ensembl Protein Viewer:ENSMUSP00000084949.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000087666Re-query CCDS DB by Protein ID:ENSMUSP00000084949
Original member Current member NCBI NM_001045559.1 NP_001039024.1 Accepted alive Link to Nucleotide Sequence:NM_001045559.1Link to Protein Sequence:NP_001039024.1Re-query CCDS DB by Nucleotide ID:NM_001045559Re-query CCDS DB by Protein ID:NP_001039024Link to BLAST:NP_001039024.1

Chromosomal Locations for CCDS 37559.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 32993238 32993258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33001624 33001750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33001958 33002018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33002758 33004063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1515 nt):
ATGCATCAAAAGCAGAGAATGGAGCCTGTGACCTTTGAGGATGTGGCTGTGAACTTCAGCCTAGGAGAGT
GGGCTCTGCTGGATTCCAGTCAAAAGAAGCTCTACAGAGATGTGATGACGGAGACCTTTATGAATCTGAT
CTCCATAGGGAAAACAGAGGAAAAAGAAAATATTGAAGACAACTACCAAAATCTCAGGAAAAATGTGAGA
ACTCTGGTGGCTGAGAGGAGTTGTGACTACGGAGATGTCAGTCAGTGTGGAGAAACCCGGCAACGGATTC
CAGAGTGTATCATTCGTAGAGACACGCCTCCTGAAATATCAGTGTGTAAAAACAGTGTGCTTGCTAGAGA
CATCCTTGTTCATTCCCTCTCAGAAGTGCACCTCAGATGTGAAACTGCAGAGAAACCCTGTGGGTCTCAG
GAATATGTGAAGTGTTGCAAAGAGTCTACTTCTTCTGAGTCCTTTCAGACAAAGCAAAGTCCTCCTCGAG
AGACACCCTATCAAAATAAGCAATCTAATGAAGCCTATAGGAGTCTTAATTCTGACCGGTATTGTGAGCA
AATTCACACTGGAGATAAACTCCGTGAATGGAAGCAAGTTGAGAAAGCCTTCTGGAGGTACAGTTACGGT
CAAATATATGAGAGAATCACCATTGGAGAGGAACCATTTGTGTGTAAGCAGTATGGTGAAGCCTTGGTTA
ATTCTAGTCATCTTATTAAACATGAAGTAATTAGCCCTGAAGAAAAATGTTACACATGTAAGCAGTGTGG
GAAGGCATTCAGATATTCCTCATCCCTTCAGAACCATGAAAGAATCCATAGCGGGGAGAGGCCATATGTA
TGTAAGCAATGTGGAAAAACCTTCATTCGTTCCTATGACCTTCTTATCCATGAAAGAATTCACAGTGGAG
AAAAACCTTACACGTGTGAGCATTGTGGAAAATCTTTCACCCATTATAGCGGCTGGTACAGTCATGAAAG
GATTCACACTAGAGAGAAACCCTATGTGTGCACACAGTGTGGGAAAGCCTTTTCATGCTCTACATCGTTC
CGGAGGCATGAAAGAATTCACACTGGAGAGAAACCTTACTCCTGTAAGCACTGTGGGAAAGCCTTCACCC
ATTCCAGTGCTCGTTACATTCATGAGCGAATTCACACCGGAGAGAAACCCTACGTTTGTAAGCACTGTGG
AAAAGCATTCCTCCGTGCCAGTCATCTCAACAACCATGAGAGAATTCACACTGGAGAGAAACCCTATATT
TGTAAGCATTGTGGGAAAGCCTTCATCCAGCGCGATGCTTGTTATAATCACGAAAGAATTCACACTGGAG
AGAAACCATATGTATGTAAGGAATGTGGAAAAGCATTTAGGATTTCCACATCCCTTCGTGACCATGAGAG
AATTCACACTGGAGAAAAACCTTACATATGTAATTATTGTGGGAAAGCATTTAGGGTCTCCACATGCCTT
CACAAACATGAACGAGCTCATGCTGAAAAGAAACCCAGTGGGTAG

Translation (504 aa):
MHQKQRMEPVTFEDVAVNFSLGEWALLDSSQKKLYRDVMTETFMNLISIGKTEEKENIEDNYQNLRKNVR
TLVAERSCDYGDVSQCGETRQRIPECIIRRDTPPEISVCKNSVLARDILVHSLSEVHLRCETAEKPCGSQ
EYVKCCKESTSSESFQTKQSPPRETPYQNKQSNEAYRSLNSDRYCEQIHTGDKLREWKQVEKAFWRYSYG
QIYERITIGEEPFVCKQYGEALVNSSHLIKHEVISPEEKCYTCKQCGKAFRYSSSLQNHERIHSGERPYV
CKQCGKTFIRSYDLLIHERIHSGEKPYTCEHCGKSFTHYSGWYSHERIHTREKPYVCTQCGKAFSCSTSF
RRHERIHTGEKPYSCKHCGKAFTHSSARYIHERIHTGEKPYVCKHCGKAFLRASHLNNHERIHTGEKPYI
CKHCGKAFIQRDACYNHERIHTGEKPYVCKECGKAFRISTSLRDHERIHTGEKPYICNYCGKAFRVSTCL
HKHERAHAEKKPSG


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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