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Report for CCDS21041.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21041.1 Public Mus musculus 7 Zfp36 23 108 98 CCDS HistoryNCBI Gene:22695Re-query CCDS DB by CCDS ID:21041.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21041.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000051241.6 ENSMUSP00000057815.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000051241.6Link to Ensembl Protein Viewer:ENSMUSP00000057815.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000051241Re-query CCDS DB by Protein ID:ENSMUSP00000057815
Original member NCBI NM_011756.4 NP_035886.1 Updated not alive Link to Nucleotide Sequence:NM_011756.4Link to Protein Sequence:NP_035886.1Re-query CCDS DB by Nucleotide ID:NM_011756Re-query CCDS DB by Protein ID:NP_035886
Current member NCBI NM_011756.5 NP_035886.1 Accepted alive Link to Nucleotide Sequence:NM_011756.5Link to Protein Sequence:NP_035886.1Re-query CCDS DB by Nucleotide ID:NM_011756Re-query CCDS DB by Protein ID:NP_035886Link to BLAST:NP_035886.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035886.1 319 P22893 319 100% 0 0

Chromosomal Locations for CCDS 21041.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 28377558 28378493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28379174 28379197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (960 nt):
ATGGATCTCTCTGCCATCTACGAGAGCCTCCAGTCGATGAGCCATGACCTGTCATCCGACCACGGAGGAA
CCGAATCCCTCGGAGGACTTTGGAACATAAACTCGGACTCCATCCCGTCTGGGGTCACCTCTCGCCTGAC
TGGCCGCTCCACTAGCCTGGTGGAGGGCCGAAGCTGTGGCTGGGTACCCCCACCCCCTGGTTTTGCACCT
TTGGCTCCCCGCCCAGGCCCTGAGCTGTCACCCTCACCTACTTCGCCTACTGCAACTCCCACCACCTCCT
CTCGATACAAGACCGAGCTCTGTCGGACCTACTCAGAAAGCGGGCGTTGTCGCTACGGGGCCAAGTGCCA
GTTTGCTCACGGCCTGGGTGAACTTCGCCAAGCCAATCGCCACCCCAAGTACAAAACGGAACTCTGCCAC
AAGTTCTACCTCCAGGGCCGCTGCCCCTATGGCTCTCGATGCCACTTCATCCACAACCCCACCGAGGACC
TAGCTCTCCCTGGCCAGCCCCATGTGCTGCGACAAAGCATCAGCTTCTCCGGCTTGCCCTCAGGCCGCAG
AAGCTCGCCGCCACCTCCAGGCTTTTCTGGCCCTTCCCTGTCCTCTTGTTCCTTTTCGCCTTCCAGCTCC
CCACCGCCCCCTGGGGATCTTCCACTTTCCCCTTCTGCCTTCTCTGCTGCCCCTGGGACCCCTGTGACTC
GAAGAGACCCTAACCAGGCCTGTTGCCCCTCCTGCCGAAGGTCTACTACCCCCAGCACCATCTGGGGGCC
CTTGGGTGGCCTGGCTCGGAGCCCATCTGCCCACTCTCTGGGATCCGATCCTGATGACTACGCCAGCAGC
GGCAGCAGCCTGGGGGGGTCAGACTCACCTGTCTTTGAGGCAGGGGTGTTTGGGCCTCCCCAGACCCCTG
CACCCCCAAGGCGTCTCCCCATCTTCAATCGTATCTCTGTCTCTGAGTGA

Translation (319 aa):
MDLSAIYESLQSMSHDLSSDHGGTESLGGLWNINSDSIPSGVTSRLTGRSTSLVEGRSCGWVPPPPGFAP
LAPRPGPELSPSPTSPTATPTTSSRYKTELCRTYSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCH
KFYLQGRCPYGSRCHFIHNPTEDLALPGQPHVLRQSISFSGLPSGRRSSPPPPGFSGPSLSSCSFSPSSS
PPPPGDLPLSPSAFSAAPGTPVTRRDPNQACCPSCRRSTTPSTIWGPLGGLARSPSAHSLGSDPDDYASS
GSSLGGSDSPVFEAGVFGPPQTPAPPRRLPIFNRISVSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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