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Report for CCDS15583.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15583.2 Public Mus musculus 1 Wdr26 23 108 98 CCDS HistoryNCBI Gene:226757Re-query CCDS DB by CCDS ID:15583.2See the combined annotation on chromosome 1 in Sequence Viewer

Public Note for CCDS 15583.1
The coding region has been updated to extend the N-terminus to one that is more supported by available available transcript, protein and conservation data.

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by CCDS collaboration)

Sequence IDs included in CCDS 15583.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000162819.8 ENSMUSP00000124592.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000162819.8Link to Ensembl Protein Viewer:ENSMUSP00000124592.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000162819Re-query CCDS DB by Protein ID:ENSMUSP00000124592
Original member NCBI NM_145514.5 NP_663489.4 Updated not alive Link to Nucleotide Sequence:NM_145514.5Link to Protein Sequence:NP_663489.4Re-query CCDS DB by Nucleotide ID:NM_145514Re-query CCDS DB by Protein ID:NP_663489
Current member NCBI NM_145514.6 NP_663489.4 Accepted alive Link to Nucleotide Sequence:NM_145514.6Link to Protein Sequence:NP_663489.4Re-query CCDS DB by Nucleotide ID:NM_145514Re-query CCDS DB by Protein ID:NP_663489Link to BLAST:NP_663489.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663489.4 641 Q8C6G8 641 100% 0 0

Chromosomal Locations for CCDS 15583.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 181177806 181177831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181181304 181181489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181182769 181182898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181183727 181183805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181184251 181184396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181185948 181186067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181187606 181187746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181191761 181191899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181197575 181197731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181198847 181198944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181203024 181203160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181209003 181209107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181209213 181209312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 181211076 181211437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1926 nt):
ATGCAGGCCAACGGGGCGGGAGGAGGCGGCGGCGGGGGCGGCGGGGGCCAGGGCCAGACCCCGGAGCTCG
CCTGCCTGTCGGCGCAGAACGGGGAGTCGTCCCCTTCGGCGACGTCCGCGGGGGACCTGGCCCACGCCAA
CGGGCTCCTGCCTGCCGCCCCCTCCGCCGCTGGCAACAATAGCAACAGCCTGAGTGTCAATAACGGGGTT
CCCGGCGGGGCCGCCGCGGCCTCCGCCACCGCCGCCGCCGCCCAGGCCACCCCCGAGCTGGGCAGCAGCC
TCAAGAAGAAGAAGCGGCTCTCGCAGTCCGATGAGGATGTCATTAGGCTCATAGGACAGCACCTCAATGG
CCTAGGGCTCAACCAGACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCGTTTAGAGCATCCTTCTGCT
ACCAAATTCCGAAATCATGTCATGGAAGGAGACTGGGATAAGGCAGAGAATGACCTGAATGAGCTAAAGC
CTTTAGTGCATTCTCCTCACGCTATTGTGGTAAGAGGCGCACTTGAAATCTCTCAAACGTTGTTGGGAAT
AATTGTGAGGATGAAGTTTCTGCTGCTGCAGCAGAAGTACCTGGAATACCTGGAGGACGGCAAGGTCCTG
GAGGCACTTCAAGTTCTACGCTGCGAACTGACGCCGTTGAAATACAACACCGAGCGCATCCATGTCCTTA
GTGGGTATCTGATGTGCAGCCATGCCGAAGACCTACGGGCAAAAGCTGAATGGGAAGGCAAGGGCACAGC
GTCCCGGTCCAAACTGCTGGACAAGCTTCAGACCTATTTACCACCATCAGTGATGCTTCCCCCACGGCGT
TTACAGACTCTCCTGCGGCAGGCGGTGGAACTACAAAGGGATCGGTGCCTATATCACAATACCAAACTTG
ACAATAATCTAGATTCTGTGTCTCTACTTATAGATCATGTTTGTAGTAGGAGGCAGTTTCCCTGTTACAC
TCAACAGATACTTACAGAGCATTGTAATGAAGTGTGGTTCTGTAAATTTTCTAATGATGGCACTAAACTA
GCAACAGGATCAAAGGATACCACAGTTATCATATGGCAAGTTGATCCGGATACGCACCTGTTAAAACTGC
TTAAAACGTTAGAAGGACATGCGTATGGTGTCTCTTATATAGCATGGAGTCCAGATGACAGCTATCTTGT
TGCTTGTGGTCCAGATGACTGCTCTGAGCTTTGGCTTTGGAATGTACAGACGGGAGAATTAAGAACAAAA
ATGAGCCAATCTCATGAAGACAGTTTGACCAGTGTGGCCTGGAATCCAGATGGGAAACGCTTTGTGACGG
GAGGTCAGCGTGGTCAGTTCTACCAGTGTGACCTGGACGGAAATCTTCTGGACTCCTGGGAAGGAGTGCG
AGTACAGTGCCTGTGGTGCTTGAGTGACGGGAAGACTGTGCTGGCTTCCGACACGCACCAGAGAGTCCGG
GGCTACAACTTTGAGGACCTGACAGATAGAAACATAGTACAGGAAGATCATCCTATTATGTCATTTACTA
TTTCCAAAAATGGCCGATTAGCTTTGTTAAATGTAGCAACTCAGGGAGTTCATTTATGGGACTTGCAAGA
CAGAGTTTTAGTAAGGAAATATCAAGGTGTTACCCAAGGGTTTTATACAATCCACTCGTGTTTTGGAGGC
CATAATGAAGACTTCATTGCTAGTGGCAGCGAAGATCACAAGGTTTACATCTGGCACAAACGTAGTGAAC
TGCCAATTGCGGAGCTCACAGGGCACACGCGCACAGTAAATTGTGTTAGCTGGAACCCACAGATTCCATC
CATGATGGCCAGTGCCTCAGACGATGGCACTGTTAGAATATGGGGACCAGCACCTTTCATAGACCACCAG
AATATTGAAGAGGAATGCAGTAGCATGGATAGTTGA

Translation (641 aa):
MQANGAGGGGGGGGGGQGQTPELACLSAQNGESSPSATSAGDLAHANGLLPAAPSAAGNNSNSLSVNNGV
PGGAAAASATAAAAQATPELGSSLKKKKRLSQSDEDVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSA
TKFRNHVMEGDWDKAENDLNELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLEDGKVL
EALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRR
LQTLLRQAVELQRDRCLYHNTKLDNNLDSVSLLIDHVCSRRQFPCYTQQILTEHCNEVWFCKFSNDGTKL
ATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTK
MSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRVR
GYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGG
HNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGPAPFIDHQ
NIEEECSSMDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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